DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oat and Gabat

DIOPT Version :9

Sequence 1:NP_649139.1 Gene:Oat / 40145 FlyBaseID:FBgn0022774 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_001163479.1 Gene:Gabat / 40188 FlyBaseID:FBgn0036927 Length:486 Species:Drosophila melanogaster


Alignment Length:430 Identity:112/430 - (26%)
Similarity:183/430 - (42%) Gaps:72/430 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 KGEGVFVWDVEGKRYFDYLSAYSAVNQGHCHPKIVAALTAQASKLALTSRAFYSDVLGEY--EEY 120
            |..|.:::||:|....|..:..|:|..|:.||::......:.:...|.:|    ..||.:  :|:
  Fly    67 KSIGNYIYDVDGNILLDVYTQISSVPLGYNHPRLYKVFNNEQNLKTLINR----PALGVFPGKEW 127

  Fly   121 VTKLF---------GFDKVLPMNTGVEGGETACKLARKWGYLEK-----------------KIP- 158
            ..||.         |.:|:..|..|....|.|.|....| |..|                 .|| 
  Fly   128 PEKLHSVLLNIAPKGLNKITTMMCGSCSNENAYKSIFIW-YQNKLRGNAPLTEQEKNSCMINIPP 191

  Fly   159 -ANQAKIIFARNNFWGRTLSAVSASN-------DPSSYEGFGPFMPGFELIEYDNVS-------- 207
             |.:..|:..:..|.||||.|:|.::       |..|::......|.:.....:||:        
  Fly   192 GAPKLSILSFKGAFHGRTLGALSTTHSKYIHKLDVPSFDWPIASFPEYRYPLDENVAHNKKEDEK 256

  Fly   208 ALEE--------SLKDPNVCAFMVEPIQGEAGVVVPSDGYLKKVRELCTKYNVLWIADEVQTGLA 264
            .|.|        :.|:| |...:|||||.|.|....|..:.:.::.:|.|..:..:.||||||..
  Fly   257 CLSEVQDLIQQYASKNP-VAGIVVEPIQSEGGDNEASPEFFRSLQAICKKNGIALLIDEVQTGGG 320

  Fly   265 RTGKLLAVDYEQVQ--PDILILGKALSGGMYPVSAVLCNDQVMLCIKPGEHGSTYGGNPLGCRVA 327
            .|||..|.::.:::  ||::...|.|..|.|     ..||. .:..:|....:|:.|:|....:.
  Fly   321 STGKFWAHEHFELESPPDVVTFSKKLQLGGY-----FHNDD-FIPNEPYRIFNTWMGDPGKVLLL 379

  Fly   328 MAALEVLQEEKLAENAFKMGDLLRNELSTLPKD---VVSVVRGKGLLNAIVINQKFDAWEVCLRL 389
            ...::|:|||||..|....|.:|:|.|.:|.|:   :::..||:|...|:.........::...|
  Fly   380 EEVVKVIQEEKLLANVDVAGKVLKNGLLSLEKEFPHILNSTRGRGTFLAVNCTNTKVRDQIIGAL 444

  Fly   390 KENGLLAKPTHGDI-IRFAPPLVINETQMRESIDIIRKTI 428
            |.:|:..... |:| |||.|.|:..|......:|..||.:
  Fly   445 KLHGIQTGGC-GEISIRFRPALIFKEYHANIVLDRFRKVL 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OatNP_649139.1 Orn_aminotrans 34..429 CDD:273853 112/430 (26%)
argD 48..428 CDD:273228 112/428 (26%)
GabatNP_001163479.1 GabT 27..484 CDD:223238 112/430 (26%)
AAT_I 27..483 CDD:302748 112/428 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439929
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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