DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oat and SPAC27F1.05c

DIOPT Version :9

Sequence 1:NP_649139.1 Gene:Oat / 40145 FlyBaseID:FBgn0022774 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_594533.1 Gene:SPAC27F1.05c / 2541971 PomBaseID:SPAC27F1.05c Length:484 Species:Schizosaccharomyces pombe


Alignment Length:409 Identity:110/409 - (26%)
Similarity:170/409 - (41%) Gaps:71/409 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 DVEGKRYFDYLSAYSAVNQGH-------CHPKIVAALTAQASKLALTSRAFYSDVLGEYEEYVTK 123
            |.:|..:.|.:.....|..|:       |..|...|      ||.:.....|.::...:...:..
pombe    85 DEKGTEHLDLIGGVGVVTVGNNNQYVWDCLQKCFDA------KLYMMGAISYRNLAAAFGRNMAL 143

  Fly   124 LFGFDKVLPMNT---GVEGGETACKLARKWGYLEKKIPANQAKIIFARNNFWGRTLSAV--SASN 183
            |....|:....|   |.|..|...||.|    |..:...|:.|.:...|:|.|:|..||  ....
pombe   144 LSPGQKLTRTWTATGGAEANEGVIKLIR----LATRYKPNKKKFLSTLNSFHGKTTGAVFLGGKE 204

  Fly   184 DPSSYEGFGPFMPGFELIEYDNVSALEESLKDPNVCAFMVEPIQGEAGVVVPSDGYLKKVRELCT 248
            ....|:...||  ..:.:.|.:..||:.:|......:|:|||||||.||:||..|||.|.|||||
pombe   205 KWQKYQSPAPF--DVDYVPYGDAEALQVALSSGMYRSFIVEPIQGEGGVIVPPPGYLAKARELCT 267

  Fly   249 KYNVLWIADEVQTGLARTGKLLAVDYEQVQPDILILGKALSGGMYPVSAVLCNDQV--------- 304
            ||:...:.||:|||..||||..|.:||.:.||.:...|..|||:.|.:..:..:::         
pombe   268 KYDTYLVLDEIQTGCGRTGKFWACEYENIIPDCIAFAKGFSGGLIPFAGYIATEELWNAAYNSLE 332

  Fly   305 --MLCIKPGEHGSTYGGNPLGCRVAMAALEVLQEEKLAENAFKMGDLL---RNELSTLPKDVVSV 364
              .|      |.:||..|.||....:|.::.:.:..|.....|:|.::   .|:|.|....|:..
pombe   333 TAFL------HTATYQENTLGLAAGVATIDYIVQNDLLSRCRKLGGIMFDRLNKLQTKFPHVMKD 391

  Fly   365 VRGKGLLNAI--------------------VINQKFDAWEVCLRLKENGLLAKPTHGDIIRFAPP 409
            |||:|::..|                    ::|...|.:.|.:....|       :..:.||.||
pombe   392 VRGRGMIVGIEFYPIPESVQEEFGEYYATPIVNDLADTYHVQVYCSLN-------NPSVFRFLPP 449

  Fly   410 LVINETQMRESIDIIRKTI 428
            |.|.|..:.|.:..:...:
pombe   450 LTIPEADLDEGLSAVESAV 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OatNP_649139.1 Orn_aminotrans 34..429 CDD:273853 110/409 (27%)
argD 48..428 CDD:273228 110/407 (27%)
SPAC27F1.05cNP_594533.1 ArgD 36..476 CDD:227325 110/409 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4992
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001891
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.770

Return to query results.
Submit another query.