DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oat and car2

DIOPT Version :9

Sequence 1:NP_649139.1 Gene:Oat / 40145 FlyBaseID:FBgn0022774 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_596588.1 Gene:car2 / 2540626 PomBaseID:SPBC21C3.08c Length:438 Species:Schizosaccharomyces pombe


Alignment Length:409 Identity:217/409 - (53%)
Similarity:298/409 - (72%) Gaps:14/409 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 SELVYARENKYGAHNYHPLPVALTKGEGVFVWDVEGKRYFDYLSAYSAVNQGHCHPKIVAALTAQ 98
            :|.:...||:|.|||||||||..:|.:|..|||.||:.|.|:||||||||||||||||:.||..|
pombe    13 TEQIEVLENEYAAHNYHPLPVCFSKAKGAKVWDPEGREYLDFLSAYSAVNQGHCHPKIIEALVEQ 77

  Fly    99 ASKLALTSRAFYSDVLGEYEEYVTKLFGFDKVLPMNTGVEGGETACKLARKWGYLEKKIPANQAK 163
            |.::.|:|||||:|..|.:.:|:|:.||::.|:|||||.|..||||||||.|||..||||.::|.
pombe    78 AQRVTLSSRAFYNDKFGPFAKYITEYFGYEMVIPMNTGAEAVETACKLARLWGYKAKKIPTDEAI 142

  Fly   164 IIFARNNFWGRTLSAVSASNDPSSYEGFGPFMPGF--------ELIEYDNVSALEESLK--DPNV 218
            |:...:||.|||:..:|.|.||.:.:.:||::|..        .::.|:|:..|:..|.  .|.|
pombe   143 ILSCVDNFHGRTMGIISMSTDPDARDNYGPYLPNVGPKISGADRVLRYNNIEDLKYYLDTFGPKV 207

  Fly   219 CAFMVEPIQGEAGVVVPSDGYLKKVRELCTKYNVLWIADEVQTGLARTGKLLAVDYEQVQPDILI 283
            .||:||||||||||:||.||||::..:||..:|||:||||||||:|||||:|.:::..|:||::|
pombe   208 AAFLVEPIQGEAGVMVPDDGYLEEAYKLCKAHNVLFIADEVQTGVARTGKMLCIEHSNVKPDVVI 272

  Fly   284 LGKALSGGMYPVSAVLCNDQVMLCIKPGEHGSTYGGNPLGCRVAMAALEVLQEEKLAENAFKMGD 348
            ||||:|||:|||||||.:.::||..:||.|||||||||||..|::|||||::||||.|.|..:|:
pombe   273 LGKAISGGVYPVSAVLSSREIMLNFEPGTHGSTYGGNPLGAAVSIAALEVVKEEKLTERAAVLGE 337

  Fly   349 LLRNELSTLPKDVVSVVRGKGLLNAIVINQK----FDAWEVCLRLKENGLLAKPTHGDIIRFAPP 409
            ..|..|......:|..|||:|||||:||::.    ..||::||.::..|:|||||||:||||:||
pombe   338 KFRTALIECKSPIVQKVRGRGLLNAVVIDESKTNGRTAWDLCLIMRSRGVLAKPTHGNIIRFSPP 402

  Fly   410 LVINETQMRESIDIIRKTI 428
            |||.|..:.:.|::|:|::
pombe   403 LVITEEDLMKGIEVIKKSL 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OatNP_649139.1 Orn_aminotrans 34..429 CDD:273853 217/409 (53%)
argD 48..428 CDD:273228 211/393 (54%)
car2NP_596588.1 Orn_aminotrans 13..422 CDD:273853 217/409 (53%)
GabT 25..424 CDD:223238 213/397 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 445 1.000 Domainoid score I74
eggNOG 1 0.900 - - E1_COG4992
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H231
Inparanoid 1 1.050 451 1.000 Inparanoid score I295
OMA 1 1.010 - - QHG63155
OrthoFinder 1 1.000 - - FOG0001891
OrthoInspector 1 1.000 - - oto101299
orthoMCL 1 0.900 - - OOG6_100416
Panther 1 1.100 - - LDO PTHR11986
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R858
SonicParanoid 1 1.000 - - X1247
TreeFam 1 0.960 - -
1413.860

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