DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rnf146 and RNF146

DIOPT Version :9

Sequence 1:NP_001137978.1 Gene:Rnf146 / 40144 FlyBaseID:FBgn0036897 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_001229778.1 Gene:RNF146 / 81847 HGNCID:21336 Length:359 Species:Homo sapiens


Alignment Length:324 Identity:124/324 - (38%)
Similarity:183/324 - (56%) Gaps:28/324 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 DSPSAAAAAL---ECPICLQTCIHPARLPCGHIFCFLCVKGVAYKNRRCAMCRREIPAEFLDHPQ 174
            :|.|..|.:|   ||.||||||:||..|||.|:||:|||||.::..:|||:||:|||.:|||.|.
Human    23 ESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCVKGASWLGKRCALCRQEIPEDFLDKPT 87

  Fly   175 LVNGIEDICTTRATEDGFQWYYEGRNGWWQYDDRTSQDIEDAFKKGDKSCTILVAGYVYIVDLEQ 239
            |::..|....:|...: :.|||||||||||||:|||:::||||.||.|:..:|:||::|:.|||.
Human    88 LLSPEELKAASRGNGE-YAWYYEGRNGWWQYDERTSRELEDAFSKGKKNTEMLIAGFLYVADLEN 151

  Fly   240 LVQQRQNEPTRCRRVKRDLATIPKKGVAGLRIEGNQVTSDTVFSRPTNTANPTTVAAAAS----- 299
            :||.|:||..|.|::|||:..||||||||||::.:..|.:.......:.|:..:..:.||     
Human   152 MVQYRRNEHGRRRKIKRDIIDIPKKGVAGLRLDCDANTVNLARESSADGADSVSAQSGASVQPLV 216

  Fly   300 SFISTIAATDAAIRI-------ASDIIGSTLAHADELTRGLTASNLNDDLSSSGEQSNSTNSNDA 357
            |.:..:.:.|..:..       ||..:..:.||. :|:...||     :.|..||......|..:
Human   217 SSVRPLTSVDGQLTSPATPSPDASTSLEDSFAHL-QLSGDNTA-----ERSHRGEGEEDHESPSS 275

  Fly   358 GRSPASSPASSSMQDLITRDLRNTQQVIAHNQHTIDLFEQALNDFQALAMRNYVDSSDEENNDQ 421
            ||.||...:....:...:.|..:...|:|  ||:  |.:|.|  ..:.|.:...|.||....|:
Human   276 GRVPAPDTSIEETESDASSDSEDVSAVVA--QHS--LTQQRL--LVSNANQTVPDRSDRSGTDR 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rnf146NP_001137978.1 RING 123..165 CDD:238093 26/41 (63%)
WWE 192..264 CDD:128922 42/71 (59%)
RNF146NP_001229778.1 RING-HC_RNF146 36..75 CDD:319460 24/38 (63%)
RING-HC finger (C3HC4-type) 37..74 CDD:319460 23/36 (64%)
WWE 104..176 CDD:128922 42/71 (59%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 254..359 23/91 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165147395
Domainoid 1 1.000 98 1.000 Domainoid score I7203
eggNOG 1 0.900 - - E1_KOG0824
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 212 1.000 Inparanoid score I3653
Isobase 1 0.950 - 0 Normalized mean entropy S5209
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004614
OrthoInspector 1 1.000 - - oto88724
orthoMCL 1 0.900 - - OOG6_107506
Panther 1 1.100 - - LDO PTHR13417
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2954
SonicParanoid 1 1.000 - - X3820
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1413.730

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