DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rnf146 and Rnf146

DIOPT Version :9

Sequence 1:NP_001137978.1 Gene:Rnf146 / 40144 FlyBaseID:FBgn0036897 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_001103666.1 Gene:Rnf146 / 68031 MGIID:1915281 Length:359 Species:Mus musculus


Alignment Length:330 Identity:128/330 - (38%)
Similarity:183/330 - (55%) Gaps:41/330 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 DSPSAAAAAL---ECPICLQTCIHPARLPCGHIFCFLCVKGVAYKNRRCAMCRREIPAEFLDHPQ 174
            :|.|..|.:|   ||.||||||:||..|||.|:||:|||||.::..:|||:||:|||.:|||.|.
Mouse    24 ESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCVKGASWLGKRCALCRQEIPEDFLDKPT 88

  Fly   175 LVNGIEDICTTRATEDGFQWYYEGRNGWWQYDDRTSQDIEDAFKKGDKSCTILVAGYVYIVDLEQ 239
            |::..|....:|...: :.|||||||||||||:|||:::||||.||.|:..:|:||::|:.|||.
Mouse    89 LLSPEELKAASRGNGE-YAWYYEGRNGWWQYDERTSRELEDAFSKGKKNTEMLIAGFLYVADLEN 152

  Fly   240 LVQQRQNEPTRCRRVKRDLATIPKKGVAGLRIEGNQVTSDTVFSRPTNTANPTTVAAAASSFIST 304
            :||.|:||..|.|::|||:..||||||||||::.:           |||.| ....::|....|.
Mouse   153 MVQYRRNEHGRRRKIKRDIIDIPKKGVAGLRLDCD-----------TNTVN-LARESSADGADSG 205

  Fly   305 IAATDAAIRIASDIIGSTLAHAD-ELTRGLTAS-----NLNDD---LSSSGEQSNSTNSNDAGRS 360
            .|.|.|::::|.......|...| :||..:|.|     :|.|.   |..||:.....:....|..
Mouse   206 SAQTGASVQLAVPSSTRPLTSVDGQLTSPVTPSPDAGISLEDSFAHLQLSGDSIAERSHRGEGEE 270

  Fly   361 PASSPASSSMQDL--------ITRDLRNTQQVIAHNQHTIDLFEQAL-NDFQALAMRNYVDSSDE 416
            ...||:|..:.|.        .:.|..:...|:|  ||::......: |..|.:|     |.||.
Mouse   271 DHESPSSGRVPDTSVEETESDASSDSEDAPVVVA--QHSLTQQRPLVPNGNQTVA-----DQSDR 328

  Fly   417 ENNDQ 421
            ...|:
Mouse   329 SGTDR 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rnf146NP_001137978.1 RING 123..165 CDD:238093 26/41 (63%)
WWE 192..264 CDD:128922 42/71 (59%)
Rnf146NP_001103666.1 RING 37..79 CDD:238093 27/41 (66%)
WWE 105..177 CDD:128922 44/71 (62%)
PAR-binding 144..167 11/22 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 197..243 14/46 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 261..359 17/81 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837326
Domainoid 1 1.000 98 1.000 Domainoid score I7203
eggNOG 1 0.900 - - E1_KOG0824
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 210 1.000 Inparanoid score I3664
Isobase 1 0.950 - 0 Normalized mean entropy S5209
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004614
OrthoInspector 1 1.000 - - oto92292
orthoMCL 1 0.900 - - OOG6_107506
Panther 1 1.100 - - LDO PTHR13417
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2954
SonicParanoid 1 1.000 - - X3820
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.730

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