DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rnf146 and F55C10.5

DIOPT Version :9

Sequence 1:NP_001137978.1 Gene:Rnf146 / 40144 FlyBaseID:FBgn0036897 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_001379405.1 Gene:F55C10.5 / 3564818 WormBaseID:WBGene00010109 Length:112 Species:Caenorhabditis elegans


Alignment Length:96 Identity:20/96 - (20%)
Similarity:37/96 - (38%) Gaps:30/96 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   366 ASSSMQDLITRDLRNTQQVIAHNQHTIDLFEQALNDFQALAMRNYVD-------SSDEENN---- 419
            :.|.|:|      |:....:.:.:|.:.|..:.:.      :.|:::       :.:|.||    
 Worm    13 SKSRMED------RSRVLTMKYGKHQMALIRKRMK------VENWIETEVTKLFNGNETNNVDID 65

  Fly   420 ---DQDQEHELRER----EQLEAGEQPQSND 443
               .||.|....:|    |||:....|.|.|
 Worm    66 LDVIQDIEDVTGKRKFAFEQLQKAHCPCSMD 96

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rnf146NP_001137978.1 RING 123..165 CDD:238093
WWE 192..264 CDD:128922
F55C10.5NP_001379405.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0824
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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