DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rnf146 and CG17124

DIOPT Version :9

Sequence 1:NP_001137978.1 Gene:Rnf146 / 40144 FlyBaseID:FBgn0036897 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_001285813.1 Gene:CG17124 / 34485 FlyBaseID:FBgn0032297 Length:124 Species:Drosophila melanogaster


Alignment Length:66 Identity:10/66 - (15%)
Similarity:27/66 - (40%) Gaps:23/66 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 WQYDDRTSQDIEDAFKKGDKSCTILVAGYVYIVDLEQLVQQRQNEPTR---------CRRVKRDL 258
            |.||     :::..|...:::..         ||:::::....::..|         |:|.:.|:
  Fly    60 WLYD-----ELQKLFDPPNEAID---------VDIDEILDMDTDDIRRSHLIRLLSVCKRPQSDI 110

  Fly   259 A 259
            :
  Fly   111 S 111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rnf146NP_001137978.1 RING 123..165 CDD:238093
WWE 192..264 CDD:128922 10/66 (15%)
CG17124NP_001285813.1 PP1_inhibitor 9..124 CDD:398826 10/66 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0824
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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