DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rnf146 and rnf146

DIOPT Version :9

Sequence 1:NP_001137978.1 Gene:Rnf146 / 40144 FlyBaseID:FBgn0036897 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_956148.2 Gene:rnf146 / 334065 ZFINID:ZDB-GENE-030131-5997 Length:364 Species:Danio rerio


Alignment Length:404 Identity:135/404 - (33%)
Similarity:199/404 - (49%) Gaps:96/404 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 SASGAAASDTDSLASSPDEGALATGVDAAAAVSGEDSPSAAAAAL-ECPICLQTCIHPARLPCGH 141
            ::.|......|||.|...       |...|...|..|||:.:..: |||||||:|:||.||||.|
Zfish     2 ASCGEVNLTVDSLTSGKK-------VSGEAVPEGSGSPSSPSLPVPECPICLQSCVHPVRLPCRH 59

  Fly   142 IFCFLCVKGVAYKNRRCAMCRREIPAEFLDHPQLVNGIEDI-------CTTRATEDGFQWYYEGR 199
            |||||||||.::.::|||:||||:|.:||:.|.|::. |::       |.|.::  |..||||||
Zfish    60 IFCFLCVKGASWHSKRCALCRREVPEDFLERPTLLSP-EELKASATGGCGTGSS--GHAWYYEGR 121

  Fly   200 NGWWQYDDRTSQDIEDAFKKGDKSCTILVAGYVYIVDLEQLVQQRQNEPTRCRRVKRDLATIPKK 264
            |||||||:|||:::||||.||.||..:|:||::|:.|||.:||.|:||..|.||:|||:..||||
Zfish   122 NGWWQYDERTSRELEDAFSKGKKSAEMLIAGFLYVADLENMVQYRRNEHGRRRRMKRDVVDIPKK 186

  Fly   265 GVAGLRIEGNQVTSDTVFSRPTNTANPTTVAAAASSFISTIAATDAAIRIASDIIGSTLAHADEL 329
            ||||||::                .:|.:.|.|..:        .|.:.::.|            
Zfish   187 GVAGLRLD----------------PDPNSSAGAVPA--------PAVVNVSVD------------ 215

  Fly   330 TRGLTASNLNDDLSSSGEQSNSTNSNDAGRS---------PA------------SSPASSS---- 369
                         .::.|:.:|.:..|.|.|         ||            :||||||    
Zfish   216 -------------GAAAERESSADGADTGVSGGRPQGTFVPAPIRPPTILGGHLTSPASSSDIQL 267

  Fly   370 MQDLITRDLRNTQQVIAHNQHTIDLFEQALNDFQALAMRNYVDSSDEENNDQDQEHEL---RERE 431
            :|.|...::...:|. ...:...|..:.|..|.......:.....||:..|:|::...   :.|.
Zfish   268 VQTLAQLNISPNEQE-PEEEDAEDEDDSAAPDASGYDSESGTSDDDEQVEDEDEDEHTDGSQGRH 331

  Fly   432 QLEAGEQPQSNDNP 445
            :|:..::|.....|
Zfish   332 RLQQLDRPPPGGGP 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rnf146NP_001137978.1 RING 123..165 CDD:238093 30/41 (73%)
WWE 192..264 CDD:128922 44/71 (62%)
rnf146NP_956148.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 18..37 6/25 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 217..262 10/44 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 279..364 12/68 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580942
Domainoid 1 1.000 99 1.000 Domainoid score I7048
eggNOG 1 0.900 - - E1_KOG0824
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004614
OrthoInspector 1 1.000 - - oto41179
orthoMCL 1 0.900 - - OOG6_107506
Panther 1 1.100 - - LDO PTHR13417
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3820
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.700

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