DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rnf146 and Ppp1r14b

DIOPT Version :9

Sequence 1:NP_001137978.1 Gene:Rnf146 / 40144 FlyBaseID:FBgn0036897 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_742042.1 Gene:Ppp1r14b / 259225 RGDID:628702 Length:147 Species:Rattus norvegicus


Alignment Length:44 Identity:14/44 - (31%)
Similarity:17/44 - (38%) Gaps:8/44 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 SAAAAAAAAAAAHSGGGSG--------EDPAVGSASGAAASDTD 88
            |..|..||.||...|.|||        :.|...:..|...:|.|
  Rat     4 SGPAGGAALAAPAPGPGSGSTGPRVYFQSPPGAAGEGPGGADDD 47

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rnf146NP_001137978.1 RING 123..165 CDD:238093
WWE 192..264 CDD:128922
Ppp1r14bNP_742042.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..55 14/44 (32%)
PP1_inhibitor 51..147 CDD:398826
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0824
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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