DRSC/TRiP Functional Genomics Resources

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Protein Alignment wnd and AT5G11850

DIOPT Version :9

Sequence 1:NP_649137.3 Gene:wnd / 40143 FlyBaseID:FBgn0036896 Length:977 Species:Drosophila melanogaster
Sequence 2:NP_196746.2 Gene:AT5G11850 / 831058 AraportID:AT5G11850 Length:880 Species:Arabidopsis thaliana


Alignment Length:439 Identity:131/439 - (29%)
Similarity:209/439 - (47%) Gaps:58/439 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQPFS-----------DSLSKSRDDLVTAASRQQ--QQLHGRRRHHGSS--PNLSLDQTDNLRRS 50
            |.|||           .::||.   :::||...:  |:||......|:|  |:|.:|...:..|.
plant   442 MPPFSGKPTCAQKVKVKNVSKY---VISAAKNPEFAQKLHAVLLESGASPPPDLFMDINPHNLRG 503

  Fly    51 MACLQD---EFGHLGIAATDLPFKSSDLDSPPRLQHHNNYAEITDSSAENTCQQRWPPHVGGAGA 112
            ...||:   |..:..::.  :|.....:....|....|..||....|.|.....:....:...|.
plant   504 KNLLQELRQESSNSMVSG--IPCYPEKVAEQLRESERNPTAESYQQSVEVDLSMKRNFDLDNTGK 566

  Fly   113 AFGHPDKPIGWMYGLLGCMKPVLSFIGKTGVIEVKSQ-------RSEDWQIPFESITELEWLGSG 170
            |....:..:|             :..|::.|.:...|       .:..|:|.:|.:...|.:|.|
plant   567 ASSSENMEVG-------------TADGESAVCDSHDQGINPLLGEAAKWEIMWEDLQIGERIGIG 618

  Fly   171 AQGAVFSGRLKNETVAVKKVKELK---------ETDIKHLRKLDHENIIKFKGVCTQSPVFCIIM 226
            :.|.|:........|||||..:..         :::|:.:.:|.|.|::.|.|..|:.|.|.|:.
plant   619 SYGEVYRAEWNGTEVAVKKFLDQDFSGDALTQFKSEIEIMLRLRHPNVVLFMGAVTRPPNFSILT 683

  Fly   227 EFCPYGPLQNILKEEQVML-PSRLVSWSKQIALGMQYLH-SH-KIIHRDLKSPNILISTNEVVKI 288
            ||.|.|.|..:|......| ..|.:..:..:|.||.||| || .::||||||||:|:..|.|||:
plant   684 EFLPRGSLYRLLHRPNHQLDEKRRMRMALDVAKGMNYLHTSHPTVVHRDLKSPNLLVDKNWVVKV 748

  Fly   289 SDFGTSR--EWNEISTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSYGVVLWEMLTCEIPYKDVDS 351
            .|||.||  ....:|:| |.|||..||||||:||||.:||.|::|:||:|||:.|..:|:|.::.
plant   749 CDFGLSRMKHHTYLSSK-STAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELATSRVPWKGLNP 812

  Fly   352 SAIIWGVGNNSLKLLVPSTCPEGFKLLVKLCWKSKPRNRPSFRQILSHL 400
            ..::..||..:.:|.:|.........:::.||:::|..||||.|::..|
plant   813 MQVVGAVGFQNRRLEIPDDIDLTVAQIIRECWQTEPHLRPSFTQLMQSL 861

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wndNP_649137.3 STYKc 161..400 CDD:214568 94/252 (37%)
STKc_MAP3K12_13 167..403 CDD:270961 94/248 (38%)
AT5G11850NP_196746.2 EDR1 140..344 CDD:291079
Pkinase_Tyr 609..861 CDD:285015 94/252 (37%)
STKc_MAP3K-like 615..861 CDD:270901 93/246 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 173 1.000 Domainoid score I1116
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1208
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR23257
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X966
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.010

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