DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wnd and ATMRK1

DIOPT Version :9

Sequence 1:NP_649137.3 Gene:wnd / 40143 FlyBaseID:FBgn0036896 Length:977 Species:Drosophila melanogaster
Sequence 2:NP_191885.1 Gene:ATMRK1 / 825501 AraportID:AT3G63260 Length:391 Species:Arabidopsis thaliana


Alignment Length:368 Identity:94/368 - (25%)
Similarity:162/368 - (44%) Gaps:72/368 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 EITDSSAENTCQQRWPPHVGGAGAAFGHPDKPIGWMYGLLGCMKPVLSF------IGKTGVIEVK 147
            ||...:|:        |.:||.|:.....::..         ....|.|      :|:|....|.
plant    13 EIGSGTAD--------PKIGGTGSRSAGEERYF---------RADTLDFSKWDLHMGQTSTSSVL 60

  Fly   148 SQRS---------EDWQIPFESITELEWLGSGAQGAVFSGRLKNETVAVK--------------- 188
            :..:         ::|:|....:.....|..|..|.|:.|....:.||||               
plant    61 TNSASTSAPAPAMQEWEIDLSKLDMKHVLAHGTYGTVYRGVYAGQEVAVKVLDWGEDGYATPAET 125

  Fly   189 -KVKELKETDIKHLRKLDHENIIKFKGV---------------------CTQSPVFCIIMEFCPY 231
             .::...|.::...:||||.|:.||.|.                     ...:...|:::|:...
plant   126 TALRASFEQEVAVWQKLDHPNVTKFIGASMGTSDLRIPPAGDTGGRGNGAHPARACCVVVEYVAG 190

  Fly   232 GPLQN-ILKEEQVMLPSR-LVSWSKQIALGMQYLHSHKIIHRDLKSPNILISTNEVVKISDFGTS 294
            |.|:. ::|:.:..||.: ::..:..:|.|:.||||..|:|||:||.|:|:..|:.:||:|||.:
plant   191 GTLKKFLIKKYRAKLPIKDVIQLALDLARGLSYLHSKAIVHRDVKSENMLLQPNKTLKIADFGVA 255

  Fly   295 R-EWNEISTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSYGVVLWEMLTCEIPYKDVDSSAIIWGV 358
            | |...........||:.:|||||:..:|.:.|.|::|:||.|||:..|::||.|...:.|...|
plant   256 RVEAQNPQDMTGETGTLGYMAPEVLEGKPYNRKCDVYSFGVCLWEIYCCDMPYADCSFAEISHAV 320

  Fly   359 GNNSLKLLVPSTCPEGFKLLVKLCWKSKPRNRPSFRQILSHLD 401
            .:.:|:..:|..||.....::|.||...|..||...:::..|:
plant   321 VHRNLRPEIPKCCPHAVANIMKRCWDPNPDRRPEMEEVVKLLE 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wndNP_649137.3 STYKc 161..400 CDD:214568 79/278 (28%)
STKc_MAP3K12_13 167..403 CDD:270961 80/275 (29%)
ATMRK1NP_191885.1 STKc_MAP3K-like 89..362 CDD:270901 79/272 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1119
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.