DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wnd and frk

DIOPT Version :9

Sequence 1:NP_649137.3 Gene:wnd / 40143 FlyBaseID:FBgn0036896 Length:977 Species:Drosophila melanogaster
Sequence 2:XP_021324228.1 Gene:frk / 567549 ZFINID:ZDB-GENE-110411-7 Length:512 Species:Danio rerio


Alignment Length:265 Identity:86/265 - (32%)
Similarity:138/265 - (52%) Gaps:25/265 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 EDWQIPFESITELEWLGSGAQGAVFSGRLKNET--VAVKKVKE--------LKETDIKHLRKLDH 206
            :.|:|...|:..|:.||:|..|.||.| |.|:|  ||||.:|.        |:|..|  ::||.|
Zfish   230 DQWEIERSSVKLLKQLGAGQFGEVFEG-LWNDTTPVAVKTLKPGNMDPKDFLREAQI--MKKLRH 291

  Fly   207 ENIIKFKGVCT-QSPVFCIIMEFCPYGPLQNILKEEQ--VMLPSRLVSWSKQIALGMQYLHSHKI 268
            ..:|:...||| :.|:: ||.|....|.|...|:.::  .:..|..:....|:|.||.||.....
Zfish   292 SKLIQLYAVCTLEEPIY-IITELMSNGSLLEYLQNDRGATLRMSDQIDMGAQVASGMAYLELQNY 355

  Fly   269 IHRDLKSPNILISTNEVVKISDFGTSREW---NEISTKMSFAGT---VAWMAPEVIRNEPCSEKV 327
            |||||.:.|:|:..|.|.|::|||.:|.:   ||.:...:..||   |.|.|||.|.....:.|.
Zfish   356 IHRDLAARNVLVGDNNVCKVADFGLARVFQMDNEDNVYEAKEGTKFPVKWTAPEAINENKFTIKS 420

  Fly   328 DIWSYGVVLWEMLTC-EIPYKDVDSSAIIWGVGNNSLKLLVPSTCPEGFKLLVKLCWKSKPRNRP 391
            |:||:|::|:|::|. :.||..:.:..::..: ....::..|..|.:....::..|||..|.:||
Zfish   421 DVWSFGILLYEIVTFGQTPYPTMTNFQVVQQL-PKGYRMSSPPNCHKCLYDIMLDCWKDVPADRP 484

  Fly   392 SFRQI 396
            :|..:
Zfish   485 TFETL 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wndNP_649137.3 STYKc 161..400 CDD:214568 83/256 (32%)
STKc_MAP3K12_13 167..403 CDD:270961 82/250 (33%)
frkXP_021324228.1 SH3_Src_like 56..109 CDD:212779
SH2_Src_family 117..212 CDD:199827
PTKc_Frk_like 230..500 CDD:270653 86/265 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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