DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wnd and ripk1l

DIOPT Version :10

Sequence 1:NP_649137.3 Gene:wnd / 40143 FlyBaseID:FBgn0036896 Length:977 Species:Drosophila melanogaster
Sequence 2:NP_001036815.1 Gene:ripk1l / 567460 ZFINID:ZDB-GENE-070705-132 Length:661 Species:Danio rerio


Alignment Length:675 Identity:153/675 - (22%)
Similarity:255/675 - (37%) Gaps:217/675 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 SGRLKNETVAVKKVKELKETDIKHLRKLDHENIIKFKGVCTQSPVFCIIMEFCPYGPLQNILKEE 241
            |||.|...        |:|..:  :.:|:|:.::|..||..:...:.::||..|.|.|..:|  |
Zfish    52 SGRQKQSL--------LEEGSL--MSRLNHQRVVKLLGVILEDGDYSLVMELIPKGNLLTML--E 104

  Fly   242 QVMLP----SRLVSWSKQIALGMQYLHSHKIIHRDLKSPNILISTNEVVKISDFG--TSREWNEI 300
            :|.:|    .|::   .:|..||.||..:::||:|||..|||:..|..:||:|.|  ||..|:::
Zfish   105 KVTVPISVKGRII---LEILEGMVYLTKNQVIHKDLKPENILVDKNFHIKIADLGLATSEVWSKL 166

  Fly   301 S-------------TKMSFAGTVAWMAPEVIR--NEPCSEKVDIWSYGVVLWEMLTCEIPYKDVD 350
            :             |....|||:.:||||.::  :...|||.|::|:.:|||.:||...||:|..
Zfish   167 TKEESRRQSRLGKKTSAHAAGTLCYMAPEHLKSIHTRSSEKSDVYSFAIVLWVILTGREPYEDAR 231

  Fly   351 SSAIIWGV---GNNSLKLLVPSTCPEGFKLLVKLCWKSKPRNRPSFRQILSHLDIAGPELLRKTE 412
            |...|...   |....:.|:|...|.....|:|.||...|..||||...                
Zfish   232 SEDQICHCVCQGERPDEALIPPNTPTDITDLMKSCWHQDPLQRPSFTDC---------------- 280

  Fly   413 KQYFETQKSWKEEVRSHLKEITQNGTNIHKYEQDLIKRRTAEWRHAQDIRMVYEDKLQKTNQLFF 477
              |......:||::.:::|...:|...:::..::|:::.                ||..||.|..
Zfish   281 --YNRFLPFYKEKLAANVKADLENLMKLYEGPEELVEKL----------------KLLNTNALIP 327

  Fly   478 ELSECMSQLQEKEKEIAERERKLPGSGYKPNRRFGNTIRKMQHYRRRLNPAPAAIQQ------QS 536
            |           :..:..|:...|             :|...     :.|..|:|:.      :.
Zfish   328 E-----------DPSLCSRDSPTP-------------LRSSD-----IGPVEASIEDLSFRSCED 363

  Fly   537 TTPDPETTPESPVKCMLYAQLDSNCQPKSYLANIIPSSGLGAPMPNKNKKVFRHRRNASGSFGAP 601
            :..:.:.||..|   .|..:|:.......:.:.|:..|                    .||..:|
Zfish   364 SVLEADATPSCP---NLELKLEQEYNYHKFGSRIVDQS--------------------DGSMWSP 405

  Fly   602 PKYSPTRDRRYQSEPENRKVQLVERQTQTDAMDVSETDISPSAEAP---------RSQPIDVPVP 657
            .:...:      |...:.::..|:..|:..|.. :|.::.|.|.|.         ||| ..||..
Zfish   406 AQQPAS------STDASSQMSSVKSWTKPSAPS-TEEELYPRAAASFDSLHRPELRSQ-FSVPQS 462

  Fly   658 NHRQL----PLQLQRVQKIAQAQARARSGSTSSAAGAVNPACPSNGNSLSTSELTYQDACSSPDQ 718
            :|.:|    .|...||:                       :||...|.::.|             
Zfish   463 DHERLRPHAHLPWNRVK-----------------------SCPEGANHVAES------------- 491

  Fly   719 LIDDVMNSNERLD--MTECCSDNENLERLGRKVIEFINENRLSIQSNTNSVSNADNGN-GGASPL 780
            |||  .|||.|.:  :|...||:                      :...|:|||.... |..:.:
Zfish   492 LID--TNSNLRFNSPVTYPASDS----------------------AFPVSISNASAIQIGSYNTM 532

  Fly   781 ELRESGNSP--CLSRCSSTHSKRRK 803
            .||.|.:||  .||...||.|:.::
Zfish   533 NLRISDSSPYSSLSTTGSTTSRYKE 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wndNP_649137.3 STKc_MAP3K12_13 167..403 CDD:270961 78/249 (31%)
ripk1lNP_001036815.1 STKc_RIP1 21..289 CDD:270929 79/269 (29%)
Death_RIP1 568..653 CDD:260048
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.