DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wnd and cdi

DIOPT Version :9

Sequence 1:NP_649137.3 Gene:wnd / 40143 FlyBaseID:FBgn0036896 Length:977 Species:Drosophila melanogaster
Sequence 2:NP_524401.2 Gene:cdi / 42289 FlyBaseID:FBgn0004876 Length:1213 Species:Drosophila melanogaster


Alignment Length:1260 Identity:247/1260 - (19%)
Similarity:389/1260 - (30%) Gaps:449/1260 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RHHGSSP-----NLSLDQTDNLRRSMACLQDEFGHLGIAATDLPFKSSDLDSPPRLQHHNNYAEI 90
            :|.|..|     .||:||.|:...|........|....|.|.....:.|..:...::|.      
  Fly     5 QHSGPGPPSEICGLSVDQVDSSAASPFIWPSTAGMCTTATTVTTSTNGDATAEAPVKHQ------ 63

  Fly    91 TDSSAENTCQQRWPPHVGGAGAAFGHPDKPIGWM-YGLLGCMKPVLSFIGKTGVIEVKSQRSEDW 154
                         |.|.|             ||: .||...  ||...|....::...|.|:...
  Fly    64 -------------PLHNG-------------GWIGNGLPPA--PVTRTISSDRLVTGSSCRALRT 100

  Fly   155 QI-PFESITEL--EWLGSGAQGAVFSGRLKNET---VAVKKVKELKET------DIKHLRKLDHE 207
            .: ...|:.:.  |.:|||....|:  ::.:.|   |.|.|:.:|:..      :::.|.||.|.
  Fly   101 AVSALYSVDDFVKEKIGSGFFSEVY--KVTHRTTGQVMVLKMNQLRANRPNMLREVQLLNKLSHA 163

  Fly   208 NIIKFKGVCTQSPVFCIIMEFCPYGPLQNILKEEQVML-PSRLVSWSKQIALGMQYLHSHKIIHR 271
            ||:.|.|||.|......:.|:...|.|:.:|..::|:| .::.:..:..||.||.|:|...|.||
  Fly   164 NILSFMGVCVQEGQLHALTEYINGGSLEQLLANKEVVLSATQKIRLALGIARGMSYVHDAGIFHR 228

  Fly   272 DLKSPNILI-----STNEVVKISDFGTSREWNEISTK--MSFAGTVAWMAPEVIRNEPCSEKVDI 329
            ||.|.|:||     ...|.| :.|||.:.:....|.|  :...|:..|::||.::.:...:..|:
  Fly   229 DLTSKNVLIRNLANDQYEAV-VGDFGLAAKIPVKSRKSRLETVGSPYWVSPECLKGQWYDQTSDV 292

  Fly   330 WSYGVVLWEMLTCEIPYKDVDSSAIIWGVGNNSLKLLVPSTCPEGFKLLVKLCWKSKPRNRPSFR 394
            :|:|::..|::.......|:......:|:...:...|.|...|..|..|...|.....::||:|.
  Fly   293 FSFGIIQCEIIARIEADPDMMPRTASFGLDYLAFVELCPMDTPPVFLRLAFYCCLYDAKSRPTFH 357

  Fly   395 QILSHLDIAGPELLRKTEKQYFETQKSWKEEVRSHLKEITQNGTNIHKYEQDLIKRR-------- 451
            .....|.:    ||.|     :|.:.|......|.|:.|..:..........|..|.        
  Fly   358 DATKKLTL----LLEK-----YEHESSAGASPLSSLELINCSPGGSDSENVTLTPRASVPTVATI 413

  Fly   452 ------TAEWRHAQDI--------------------------RMVYEDKLQKTNQLFFELSECMS 484
                  |...||.|::                          ...::|.:.|        |....
  Fly   414 CTAPAGTLTPRHLQEVDEDGFRFPSKKSASAALPGTPNGSAGSSGFDDHILK--------SRVRR 470

  Fly   485 QLQEKEKEIAERERKLPGSGYKPNRRFGNTIRKMQHYRRRLNPAPAA----IQQQSTTPDPETTP 545
            ..|:.|.||....|.|.              ..:.|:....:|:..|    :|:|.::....|.|
  Fly   471 ATQKLEAEILLHRRSLS--------------ENIIHFPMHTSPSDKARCHQMQRQRSSTHSPTPP 521

  Fly   546 ESPVKCMLYAQLDSNCQPKSYLANIIPSSGLGAPMPNKNKKVFRHRRNASGSFGAPPKYSPTRDR 610
            .         ||.|...|    |..||..   .|:|.....|...|:...      |:|.||.::
  Fly   522 R---------QLSSVQLP----ATSIPDP---PPLPKPVPAVLTLRKVGD------PQYKPTSEK 564

  Fly   611 RYQSEPEN-----------RKV----------------------------QLVERQTQTDAM--- 633
            .:.....|           :|:                            :|...|::..|.   
  Fly   565 DHNGSKPNPFEALAQLRGVKKILDANPKTYAAGVGDLFSSCFEMLAPFFKELAAMQSKAGAQGGG 629

  Fly   634 ---DVSETDISPSAEAPRSQPIDVPVPNH---RQLPLQLQRVQKIAQAQARA------------- 679
               :.:.|....||..| |:|..:||..|   :...::|:..|:|:.|...|             
  Fly   630 TSTEETSTGNKASAATP-SEPKSLPVSPHMTRKYSAIELRLPQRISNAAPPAVTSAPPPSIALPT 693

  Fly   680 ---------------------RSGSTSSAAGAVNP---------------ACP----SNGNSL-- 702
                                 ....:||...||.|               |.|    |||.|:  
  Fly   694 DEDDCDDCNSEGEDPDGGGNCADAESSSDDSAVRPSTVPTARKYRANSLYAHPLFRGSNGTSMKS 758

  Fly   703 -STSEL---TYQDACSSPDQLIDDVMNSNERLDMTE--------------------------C-- 735
             ||.|.   |...|.:|...|...|..:|...|:||                          |  
  Fly   759 TSTGEFESPTLLKASASTITLTASVGATNSCEDLTESARKSKEQASSGATAAVQALPTPMSGCST 823

  Fly   736 -----------CSDNE------------------------NLERLGRKVIE------FINENRLS 759
                       |:|.|                        ||.|  |..||      |..|:..:
  Fly   824 RLVETPVSVSSCTDLELDELKNTCDLNELKNSCEQLPLKTNLTR--RDSIESGFFSCFNEESDAA 886

  Fly   760 IQSNT-----NSVSNADNGNGGASPLELRESGNS---------------PCLS------------ 792
            |.:|:     |.:.:...|.||        .|||               .|:|            
  Fly   887 ITNNSFGRQLNGIGSLGFGCGG--------GGNSSNCCYEKLKTQLMLDACVSADSEINDKLASL 943

  Fly   793 -RC----------------SSTHSKRRKHPLGDNPNGSS-----------IGNANGESHEQDSWS 829
             ||                ::...:::.|.|.|..:.||           ||.....|...||..
  Fly   944 CRCCYYATSTSNAAVTAAAAAAQQQQQSHLLNDTSSTSSSVLLIDNDPAVIGGNTSSSTALDSMD 1008

  Fly   830 DEEGETTDYKYALRRRSIGRQPI--ARGMRPRRSYKAPLSQKIAIHKRNVVIVSDEEENTSEYSH 892
            |.:.:....:...:||......:  ..|...:.:..|.|..::|:         |.|.:|. ...
  Fly  1009 DLDADIVASRRTHQRRYTCHHALLSGNGSESQMAATASLINRLAL---------DSEIHTL-LQR 1063

  Fly   893 SPSSQHSTL-----------ESNTDIA-----------DMKKTQATSTSSNSYS--------EPE 927
            ||.:.:..|           :|:.||:           |...|...||.|...:        :.:
  Fly  1064 SPFATNQLLYCKNRTSSIYTDSSDDISSLAGSDSLLWDDRSFTALPSTRSAQIAKIVEYFERKRQ 1128

  Fly   928 DDSSDSSDEEQGNRPTEAKAEGPAL 952
            |.|..|.....||....|.....||
  Fly  1129 DSSPPSVHHRNGNGTVAAAVAASAL 1153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wndNP_649137.3 STYKc 161..400 CDD:214568 68/257 (26%)
STKc_MAP3K12_13 167..403 CDD:270961 68/252 (27%)
cdiNP_524401.2 TyrKc 113..363 CDD:197581 68/252 (27%)
PKc_like 116..370 CDD:304357 71/265 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445251
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.