DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wnd and Src

DIOPT Version :9

Sequence 1:NP_649137.3 Gene:wnd / 40143 FlyBaseID:FBgn0036896 Length:977 Species:Drosophila melanogaster
Sequence 2:XP_006499126.1 Gene:Src / 20779 MGIID:98397 Length:552 Species:Mus musculus


Alignment Length:561 Identity:131/561 - (23%)
Similarity:205/561 - (36%) Gaps:174/561 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SKSRDDLVTAASRQQQQLHGRRRHHGSSPNLSLDQTDNLRRSMACLQDEFGHLGIAATDLP---- 69
            ||.:|     ||::::.|......||:.......||.:...|..      ||.|.:|..:|    
Mouse     6 SKPKD-----ASQRRRSLEPSENVHGAGGAFPASQTPSKPASAD------GHRGPSAAFVPPAAE 59

  Fly    70 ------FKSSDLDSPP---------------------------------RLQHHNNYAEITDSSA 95
                  |.|||..:.|                                 |||..||..::..|..
Mouse    60 PKLFGGFNSSDTVTSPQRAGPLAGGVTTFVALYDYESRTETDLSFKKGERLQIVNNTRKVDVSQT 124

  Fly    96 ENTCQ--QR----WPPHVGGAGAAFGHPDKPIG---------WMYG----------LLGCMKPVL 135
            ..|.:  ||    |..|....|.....|...:.         |.:|          ||....|..
Mouse   125 WFTFRWLQREGDWWLAHSLSTGQTGYIPSNYVAPSDSIQAEEWYFGKITRRESERLLLNAENPRG 189

  Fly   136 SFIGK------------------------------------------------------------ 140
            :|:.:                                                            
Mouse   190 TFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHAD 254

  Fly   141 -----------TGVIEVKSQRSEDWQIPFESITELEWLGSGAQGAVFSGRLKNET-VAVKKVKE- 192
                       |...:.:....:.|:||.||:.....||.|..|.|:.|.....| ||:|.:|. 
Mouse   255 GLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG 319

  Fly   193 -------LKETDIKHLRKLDHENIIKFKGVCTQSPVFCIIMEFCPYGPLQNILKEE---QVMLPS 247
                   |:|..:  ::||.||.:::...|.::.|:: |:.|:...|.|.:.||.|   .:.|| 
Mouse   320 TMSPEAFLQEAQV--MKKLRHEKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLP- 380

  Fly   248 RLVSWSKQIALGMQYLHSHKIIHRDLKSPNILISTNEVVKISDFGTSR--EWNEISTKMSFAGTV 310
            :||..|.|||.||.|:.....:||||::.|||:..|.|.|::|||.:|  |.||.:.:......:
Mouse   381 QLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 445

  Fly   311 AWMAPEVIRNEPCSEKVDIWSYGVVLWEMLT-CEIPYKDVDSSAIIWGVGNNSLKLLVPSTCPEG 374
            .|.|||.......:.|.|:||:|::|.|:.| ..:||..:.:..::..| ....::..|..|||.
Mouse   446 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES 509

  Fly   375 FKLLVKLCWKSKPRNRPSFRQILSHLDIAGPELLRKTEKQY 415
            ...|:..||:.:|..||:|..:.:.|:    :....||.||
Mouse   510 LHDLMCQCWRKEPEERPTFEYLQAFLE----DYFTSTEPQY 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wndNP_649137.3 STYKc 161..400 CDD:214568 80/253 (32%)
STKc_MAP3K12_13 167..403 CDD:270961 81/250 (32%)
SrcXP_006499126.1 SH3_Src 87..159 CDD:212941 13/71 (18%)
SH2_Src_Src 163..263 CDD:198228 6/99 (6%)
PTKc_Src 276..552 CDD:270656 90/280 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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