DRSC/TRiP Functional Genomics Resources

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Protein Alignment wnd and Ripk1

DIOPT Version :10

Sequence 1:NP_649137.3 Gene:wnd / 40143 FlyBaseID:FBgn0036896 Length:977 Species:Drosophila melanogaster
Sequence 2:NP_033094.3 Gene:Ripk1 / 19766 MGIID:108212 Length:656 Species:Mus musculus


Alignment Length:654 Identity:145/654 - (22%)
Similarity:251/654 - (38%) Gaps:175/654 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 VAVKKV---------KELKETDIKHLRKLDHENIIKFKGVCTQSPVFCIIMEFCPYGPLQNILKE 240
            |.:|||         .|:...:.|.:.:|.|..::|..|:..:...:.::||:...|.|.::||.
Mouse    42 VILKKVYTGPNRAEYNEVLLEEGKMMHRLRHSRVVKLLGIIIEEGNYSLVMEYMEKGNLMHVLKT 106

  Fly   241 E---QVMLPSRLVSWSKQIALGMQYLHSHKIIHRDLKSPNILISTNEVVKISDFGTS--REWNEI 300
            :   .:.|..|::   .:...||.|||...:||:|||..|||:..:..:||:|.|.:  :.|:::
Mouse   107 QIDVPLSLKGRII---VEAIEGMCYLHDKGVIHKDLKPENILVDRDFHIKIADLGVASFKTWSKL 168

  Fly   301 -------------STKMSFAGTVAWMAPEVIR--NEPCSEKVDIWSYGVVLWEMLTCEIPYKDV- 349
                         :||.:..||:.:||||.:.  |...:||.|::|:|:|||.:...:.||::| 
Mouse   169 TKEKDNKQKEVSSTTKKNNGGTLYYMAPEHLNDINAKPTEKSDVYSFGIVLWAIFAKKEPYENVI 233

  Fly   350 --DSSAIIWGVGNNSLKLLVPSTCPEGFKLLVKLCWKSKPRNRPSFRQI--------LSHLDIAG 404
              :...|....||......:...||.....|::.||::.|.:||:|..|        |||.:...
Mouse   234 CTEQFVICIKSGNRPNVEEILEYCPREIISLMERCWQAIPEDRPTFLGIEEEFRPFYLSHFEEYV 298

  Fly   405 PELLRKTEKQY----------FETQ---------KSWKEEVRS-HLKEITQNG-------TNIHK 442
            .|.:...:|:|          |..|         :|..|:..| |..:..|.|       ::..:
Mouse   299 EEDVASLKKEYPDQSPVLQRMFSLQHDCVPLPPSRSNSEQPGSLHSSQGLQMGPVEESWFSSSPE 363

  Fly   443 YEQDLIKRRTAEWRHAQDIRMVYEDKLQK--TNQLFFELSECMSQLQEKEKEI--AERERKLPGS 503
            |.||            ::.|.| :.|||:  :...|...:|..::.|.::.|.  .|.|||    
Mouse   364 YPQD------------ENDRSV-QAKLQEEASYHAFGIFAEKQTKPQPRQNEAYNREEERK---- 411

  Fly   504 GYKPNRRFGNTIRKMQH-----YRRRLNPAPAAIQQQSTTPDPETTPESPVKCMLYAQLDSNCQP 563
                        |::.|     .|.|.|...|..:..|   ||.||.....           .|.
Mouse   412 ------------RRVSHDPFAQQRARENIKSAGARGHS---DPSTTSRGIA-----------VQQ 450

  Fly   564 KSYLA-NIIPSSGLGAPMPNKNKKVFRHRRNASGSFGAPPKYSPTRDRRYQSEPENRKVQLVERQ 627
            .|:.| ..:.::||             :.::..|:.|....|.|...:.|               
Mouse   451 LSWPATQTVWNNGL-------------YNQHGFGTTGTGVWYPPNLSQMY--------------- 487

  Fly   628 TQTDAMDVSETDISPSAEAPRSQPIDVPVPNHRQLPLQLQRVQKIAQAQARARSGSTSSAAGAVN 692
             .|....|.||:|          |...|...:...|:....::......:..:.|:.:.....:|
Mouse   488 -STYKTPVPETNI----------PGSTPTMPYFSGPVADDLIKYTIFNSSGIQIGNHNYMDVGLN 541

  Fly   693 PACPSN---GNSLSTSELTYQDACSSPDQLIDDV--------MNSNERLDMTECCSD--NENLER 744
            ...|:|   ..|.|..:..:.:..|..|:.::.:        .|...:|..||...|  :.:.||
Mouse   542 SQPPNNTCKEESTSRHQAIFDNTTSLTDEHLNPIRENLGRQWKNCARKLGFTESQIDEIDHDYER 606

  Fly   745 LGRK 748
            .|.|
Mouse   607 DGLK 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wndNP_649137.3 STKc_MAP3K12_13 167..403 CDD:270961 72/257 (28%)
Ripk1NP_033094.3 Protein Kinases, catalytic domain 23..291 CDD:473864 69/251 (27%)
Interaction with SQSTM1. /evidence=ECO:0000250|UniProtKB:Q13546 291..567 65/357 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 327..373 10/57 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 388..423 9/50 (18%)
RIP homotypic interaction motif (RHIM). /evidence=ECO:0000269|PubMed:18442983, ECO:0000269|PubMed:27819681, ECO:0000269|PubMed:27819682 520..536 1/15 (7%)
Death_RIP1 568..653 CDD:260048 10/43 (23%)

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