DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wnd and sel-15

DIOPT Version :9

Sequence 1:NP_649137.3 Gene:wnd / 40143 FlyBaseID:FBgn0036896 Length:977 Species:Drosophila melanogaster
Sequence 2:NP_001366799.1 Gene:sel-15 / 175225 WormBaseID:WBGene00016030 Length:847 Species:Caenorhabditis elegans


Alignment Length:344 Identity:100/344 - (29%)
Similarity:160/344 - (46%) Gaps:54/344 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 KTGVIEVKSQRSEDWQIPFESITELEWLGSGAQGAVFSGRLKNETVAVKKVKEL-----KETD-- 197
            |..:::::|.....:.:....|...|.:|||:.|.|:.|..:.:.||||:.:.:     .|||  
 Worm   495 KADLLQLRSALPAPFHLCLAEIEFQESIGSGSFGKVYKGTYRGKLVAVKRYRAMAFGCKSETDML 559

  Fly   198 ---IKHLRKLDHENIIKFKGVCTQSP-VFCIIMEFCPYGPLQNILKEE-QVMLPSRLVSWSKQIA 257
               :..|.:|.|.|::.|.|.....| .|.||.||...|.|..:|.|| :||.|:..:..|..:|
 Worm   560 CREVSILSRLAHPNVVAFVGTSLDDPSQFAIITEFVENGSLFRLLHEEKRVMDPAFRLRISLDVA 624

  Fly   258 LGMQYLH---SHKIIHRDLKSPNILISTNEVVKISDFGTSR----EWNEISTKMSFAGTVAWMAP 315
            .||:|||   :..:|||||.|.||||..:....::|||.||    ..:|..||.  .|.:.||||
 Worm   625 RGMRYLHESAAKPVIHRDLNSHNILIHADGRSVVADFGESRFVCQREDENLTKQ--PGNLRWMAP 687

  Fly   316 EVI-RNEPCSEKVDIWSYGVVLWEMLTCEIPYKDVDSSA----IIWGVGNNSLKLLVPSTCPEGF 375
            ||. ::.....|||::|:.:|:||:.|.|:|:..:..:|    :.:..|..:|.....:..|...
 Worm   688 EVFSQSGKYDRKVDVFSFALVIWEIHTAELPFSHLKPAAAAAEMTYKRGRPTLPNQPTAQFPAHI 752

  Fly   376 KLLVKLCWKSKPRNRPSFRQIL---------SHLDIAGPELLRKTEKQYFETQKSWKE------- 424
            ..|:...|..:..:||.|.:|:         :|.||:.|..:.:...|       |::       
 Worm   753 LSLIPQAWHPESSSRPDFVEIVALLEPHVESTHTDISAPSTVSQLTSQ-------WEQLSVAPPP 810

  Fly   425 -----EVRSHLKEITQNGT 438
                 .:.|.|..|...||
 Worm   811 ASKFPPILSALHGIAATGT 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wndNP_649137.3 STYKc 161..400 CDD:214568 87/271 (32%)
STKc_MAP3K12_13 167..403 CDD:270961 87/268 (32%)
sel-15NP_001366799.1 ANKYR 3..217 CDD:223738
ANK repeat 115..147 CDD:293786
PHA03095 128..>388 CDD:222980
ANK repeat 153..180 CDD:293786
ANK repeat 182..213 CDD:293786
ANK repeat 215..246 CDD:293786
ANK repeat 285..318 CDD:293786
ANK repeat 320..353 CDD:293786
ANKYR <323..458 CDD:223738
ANK repeat 355..380 CDD:293786
PKc_TNNI3K 522..780 CDD:270966 85/259 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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