DRSC/TRiP Functional Genomics Resources

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Protein Alignment wnd and Frk

DIOPT Version :9

Sequence 1:NP_649137.3 Gene:wnd / 40143 FlyBaseID:FBgn0036896 Length:977 Species:Drosophila melanogaster
Sequence 2:NP_001153016.1 Gene:Frk / 14302 MGIID:103265 Length:512 Species:Mus musculus


Alignment Length:312 Identity:103/312 - (33%)
Similarity:161/312 - (51%) Gaps:37/312 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 KPVLSFIGKTGVIEVKSQRSEDWQIPFESITELEWLGSGAQGAVFSGRLKNET-VAVKKVKE--- 192
            ||.|.....| ..::..:.::.|:|...||..|:.||||..|.|:.|...|.| ||||.:|.   
Mouse   213 KPCLKIQVPT-PFDLSYKTADQWEIDRNSIQLLKRLGSGQFGEVWEGLWNNTTPVAVKTLKPGSM 276

  Fly   193 -----LKETDIKHLRKLDHENIIKFKGVCT-QSPVFCIIMEFCPYGPLQNILKEE---QVMLPSR 248
                 |:|..|  ::.|.|..:|:...||| :.|:: ||.|...:|.||..|:.:   ::.|..:
Mouse   277 DPNDFLREAQI--MKSLRHPKLIQLYAVCTLEDPIY-IITELMRHGSLQEYLQNDGGSKIHLIQQ 338

  Fly   249 LVSWSKQIALGMQYLHSHKIIHRDLKSPNILISTNEVVKISDFGTSREW---NE--ISTKMSFAG 308
             |..:.|:|.||.||.|...|||||.:.|:|:..:.:.|::|||.:|.:   ||  ..:|.....
Mouse   339 -VDMAAQVASGMAYLESQNYIHRDLAARNVLVGEHNIYKVADFGLARVFKVDNEDIYESKHEIKL 402

  Fly   309 TVAWMAPEVIRNEPCSEKVDIWSYGVVLWEMLTC-EIPYKDVDSSAIIWGVGNNSLKLLVPSTCP 372
            .|.|.|||.||....|.|.|:||:|::|:|::|. ::||..:..:.:|..:..| .:|..||.||
Mouse   403 PVKWTAPEAIRTNKFSIKSDVWSFGILLYEIITYGKMPYSGMTGAQVIQMLSQN-YRLPQPSNCP 466

  Fly   373 EGFKLLVKLCWKSKPRNRPSFRQILSHLDIAGPELLRKTEKQYFETQKSWKE 424
            :.|..::..||..:|:.||:|            |.|....:.||||..|:.:
Mouse   467 QQFYSIMLECWNVEPKQRPTF------------ETLHWKLEDYFETDCSYSD 506

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
wndNP_649137.3 STYKc 161..400 CDD:214568 89/257 (35%)
STKc_MAP3K12_13 167..403 CDD:270961 87/254 (34%)
FrkNP_001153016.1 SH3_Src_like 54..111 CDD:212779