DRSC/TRiP Functional Genomics Resources

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Protein Alignment wnd and ripk2

DIOPT Version :10

Sequence 1:NP_649137.3 Gene:wnd / 40143 FlyBaseID:FBgn0036896 Length:977 Species:Drosophila melanogaster
Sequence 2:XP_002939201.2 Gene:ripk2 / 100496958 XenbaseID:XB-GENE-493052 Length:553 Species:Xenopus tropicalis


Alignment Length:568 Identity:132/568 - (23%)
Similarity:219/568 - (38%) Gaps:179/568 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 GGAGAAFGHPDKPIGWMYGL---LGCMKPVLSFIGKTGVIEVKSQRSEDWQ-IPFESITELEWLG 168
            |..|:|..:|.   |..|.|   .|...|..|.             |...| ||::.:|:|:::.
 Frog     6 GSRGSASTYPS---GTRYSLNLEEGISVPAASI-------------SSSLQCIPYQKLTDLKFIN 54

  Fly   169 SGAQGAVFSG-----RLKNETVAVK------------KVKELKETDIKHLRKLDHENIIKFKGVC 216
            .||.|.|.|.     |::   ||||            :.|.|||.:|.|..:..:  |:...|:|
 Frog    55 KGAYGTVHSACHSDWRVR---VAVKFFPTERHLVESERNKILKEAEILHKARFSY--ILPILGIC 114

  Fly   217 TQSPVFCIIMEFCPYGPLQNILKEEQVMLPSRLVSWS------KQIALGMQYLH--SHKIIHRDL 273
            .:.....|:.|:...|.|..:|.|.   .|...:.|.      .:||||:.:||  :..::|.||
 Frog   115 NEPECLGIVTEYMTNGSLNQLLHEN---APRVEIVWPLAFRILYEIALGVNFLHNLTPSLLHHDL 176

  Fly   274 KSPNILISTNEVVKISDFGTSREWNEISTKMSFA------GTVAWMAPE-----VIRNEPCSEKV 327
            |:.|||:..:...||:|||.|: |..:|:..|::      ||:.:|.||     ..||...|.|.
 Frog   177 KTQNILLDRDFHAKIADFGLSK-WRMLSSSHSYSDQSTPGGTIIYMPPEEYEPSSARNRRGSVKH 240

  Fly   328 DIWSYGVVLWEMLTCEIPYKDVDS-SAIIWGVGNNSLKLL----VPSTCP--EGFKLLVKLCWKS 385
            |::|:.:::||:|..:.||:...: ..|::.|...:...|    :||..|  :.|..|::..|.:
 Frog   241 DMYSFAIIMWEVLARKQPYEGATTPMQIMFSVSKGNRPDLSEESLPSEIPHRDLFISLMQSGWAT 305

  Fly   386 KPRNRPSFRQILSHLDIAGPELLRKTEKQYFETQKSWKEEVRSHLKEITQNGTNIHKYEQDLIKR 450
            .|.:||:|.:.|..|:                                    ..|..|::.||  
 Frog   306 DPNDRPAFIKCLLELE------------------------------------PIIRNYDEILI-- 332

  Fly   451 RTAEWRHAQDIRMVYEDKLQKTNQLFFELSE-----CMSQLQEKEKEIAERERKLPGSGYKPNRR 510
                      :..:.:.|..|||.....:|.     |::.|::                  |...
 Frog   333 ----------LEGILQIKKMKTNFQHNSISNFPTMPCVNLLEQ------------------PAAN 369

  Fly   511 FGN---TIRKMQHYRRRLNPAPAAIQQQSTTPDPETTP-----------ESPVKCMLYAQLDSNC 561
            ..|   .|||.:.|   :.|..:::..:.....|.|.|           .||.:|:         
 Frog   370 SSNENVNIRKSEEY---VIPQCSSVLNKEWNVCPRTEPVKIENEDISLVTSPTRCL--------- 422

  Fly   562 QPKSYLA-NIIPSSGLGAPMPNKNKKVFRHRRNA--SGSFGAPPKYSP 606
              ||.:. ::||:...|...|.     |..|::|  :.....|.:.||
 Frog   423 --KSSIPYSVIPAIPCGIMHPE-----FTERQSARPTWEMSDPVQESP 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wndNP_649137.3 STKc_MAP3K12_13 167..403 CDD:270961 80/278 (29%)
ripk2XP_002939201.2 Protein Kinases, catalytic domain 49..333 CDD:473864 85/340 (25%)
DD 468..553 CDD:472698
Blue background indicates that the domain is not in the aligned region.

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