DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wnd and map3k20

DIOPT Version :10

Sequence 1:NP_649137.3 Gene:wnd / 40143 FlyBaseID:FBgn0036896 Length:977 Species:Drosophila melanogaster
Sequence 2:XP_002934652.2 Gene:map3k20 / 100495797 XenbaseID:XB-GENE-985435 Length:790 Species:Xenopus tropicalis


Alignment Length:884 Identity:215/884 - (24%)
Similarity:349/884 - (39%) Gaps:245/884 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 QIPFESITELEWLGSGAQGAVFSGR--LKNETVAVKKVKEL-KETDIKHLRKLDHENIIKFKGVC 216
            ||.|:.:...|..|.|:.|:|:..:  .:::.|||||:.:: ||.:|  |..|.|.|:|:|.|..
 Frog    10 QIKFDDLQFFENCGGGSFGSVYRAKWLSQDKEVAVKKLLKIEKEAEI--LSMLSHRNVIQFYGAV 72

  Fly   217 TQSPVFCIIMEFCPYGPLQNILK--EEQVMLPSRLVSWSKQIALGMQYLHSH---KIIHRDLKSP 276
            .:.|.:||:.|:...|.|.:.:.  ..:.|....:::||..:|.||.|||..   ::|||||||.
 Frog    73 LEPPNYCIVTEYAACGSLYDYINSTRSENMDMDHIMAWSMDVAKGMHYLHMEAPIRVIHRDLKSR 137

  Fly   277 NILISTNEVVKISDFGTSREWNEISTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSYGVVLWEMLT 341
            |::|:.:.::||.|||.|| ::..:|.||..||..|||||||::.|.||..|.:|||||||||||
 Frog   138 NVVITMDGILKICDFGASR-FHSHTTHMSLVGTFPWMAPEVIQSLPVSETCDTYSYGVVLWEMLT 201

  Fly   342 CEIPYKDVDSSAIIWGVGNNSLKLLVPSTCPEGFKLLVKLCWKSKPRNRPSFRQILSHLD-IAGP 405
            .|:|:|.::...:.|.|...:.:|.:||:||:.|..|:..||::..:.||||:||:|:|: ::..
 Frog   202 REVPFKGLEGLQVAWLVVEKNERLTIPSSCPQSFAELMHQCWEADSKKRPSFKQIISNLESMSND 266

  Fly   406 ELLRKTEKQYFETQKSWKEEVRSHLKEITQNGTNIHKYEQDLIKRRTAEWRHAQDIRMVYEDKL- 469
            ..|......:...:..|:.|:...|:.:.:...::...||:|.:|.    :|.:    ::|.|| 
 Frog   267 SKLPDQCNSFLHNKAEWRCEIEETLERLKRLERDLSYKEQELKERE----KHLK----MWEKKLT 323

  Fly   470 -QKTNQLFFELSEC----------MSQLQEKEKE-------------------IAERERKLPGSG 504
             |....|......|          |.||.:.:.|                   :.||:.|..|..
 Frog   324 EQSHTPLLPSFDICAWTEEDVYVWMQQLVKSDDENMYASLFRQHHITGKRLLLLEERDLKDMGIV 388

  Fly   505 YKPN-RRFGNTIRKMQHYRRRLNPAPAAIQQQSTTPDPE-----------------TTPESPVKC 551
            .|.: ......|.|:.|....|...|..|:...:..|.|                 :.||. .|.
 Frog   389 SKGHIIHLKTAIEKLTHDYLNLFHFPPLIKDFESENDEEEKLVNLELVFGYHLKSGSCPED-YKW 452

  Fly   552 MLYAQLDSNCQPKSYLANIIPSSGLGAPMPNK--------------------------------N 584
            .:|.:||.:....:|:.::..:.......|.|                                .
 Frog   453 KMYMELDGDEIAITYIKDVTFNRNQPDVEPLKMTKPPFVMEKWIVGIRENETVECIVTYENDVRT 517

  Fly   585 KKVFRH--------------RRNASGSFGAPPKYSPTRDRRYQSEPENRKVQLVE-RQTQTDAMD 634
            .|:.:|              .::...:..:|...|.::...|:|..:.:.:..:. ||..|    
 Frog   518 PKITKHIHKIHWDKMKMQDAVKSVQLAIMSPLLTSESKQSNYESSVDCQWIYTLRMRQMAT---- 578

  Fly   635 VSETDISPSAEAPRSQPIDVPVPNHRQLPLQLQRVQKIAQAQARARSGSTSSAAGAVNPACPSNG 699
              .|....:|..||||  ...:.|..|:...||..:..|.|..|.|:..|               
 Frog   579 --PTSPQHAAGLPRSQ--SSSLSNLSQILPYLQNQESYAAAVRRIRASPT--------------- 624

  Fly   700 NSLSTSELTYQDACSSPDQLIDDVMNSNERLDMTECCSDNENLERLGRKVIEFINENRLSIQSNT 764
              |..:.:.|..: |||.|.                     .|.:         |.:.|||||: 
 Frog   625 --LQVTSINYSRS-SSPTQF---------------------GLAK---------NLSSLSIQSS- 655

  Fly   765 NSVSNADNGNGGASPLELRESGNSPCLSRCSSTHSKRRKHPLGDNPNGSSIGNANGESHEQDSWS 829
                                .|:|...:...|...:.|.|   ..||.||.      .|.:.|  
 Frog   656 --------------------KGSSASSTASDSPSERERAH---RTPNNSSY------QHNRHS-- 689

  Fly   830 DEEGETTDYKYALRRRSIGRQPIARGMRPRRSYKA---------PLSQKIAIHKRNVVI------ 879
                      ..::|||.||.|   .|...::||:         |..|:.....:|..|      
 Frog   690 ----------TPMQRRSGGRSP---QMNSGKNYKSYTVTYSHSRPFEQRPQRTNQNRYIPGMPKL 741

  Fly   880 -----VSDEEENTS-------EYSHSPSSQHSTLESNTD 906
                 |:.||:|.:       :||.....|.:|.:|:.|
 Frog   742 ESDAAVNGEEKNNNDGGWIKVDYSKKTHKQTTTSKSHKD 780

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wndNP_649137.3 STKc_MAP3K12_13 167..403 CDD:270961 99/244 (41%)
map3k20XP_002934652.2 Protein Kinases, catalytic domain 22..263 CDD:473864 99/243 (41%)
SAM_superfamily 338..404 CDD:472832 11/65 (17%)

Return to query results.
Submit another query.