DRSC/TRiP Functional Genomics Resources

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Protein Alignment wnd and abl1

DIOPT Version :10

Sequence 1:NP_649137.3 Gene:wnd / 40143 FlyBaseID:FBgn0036896 Length:977 Species:Drosophila melanogaster
Sequence 2:XP_002936228.2 Gene:abl1 / 100490771 XenbaseID:XB-GENE-6054675 Length:1128 Species:Xenopus tropicalis


Alignment Length:914 Identity:207/914 - (22%)
Similarity:335/914 - (36%) Gaps:262/914 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 SQRSEDWQIPFESITELEWLGSGAQGAVFSGRLK--NETVAVKKVKE--------LKETDIKHLR 202
            |...:.|:|....||....||.|..|.|:.|..|  |.|||||.:||        |||..:  ::
 Frog   256 SPNYDKWEIERTDITMKHKLGGGQYGEVYEGVWKKYNLTVAVKTLKEDTMEVEEFLKEAAV--MK 318

  Fly   203 KLDHENIIKFKGVCTQSPVFCIIMEFCPYGPLQNILKE--EQVMLPSRLVSWSKQIALGMQYLHS 265
            ::.|.|:::..||||:.|.|.||.||..||.|.:.|::  .|.:....|:..:.||:..|:||..
 Frog   319 EVKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRDCNRQEVTAVVLLHMATQISSAMEYLEK 383

  Fly   266 HKIIHRDLKSPNILISTNEVVKISDFGTSREWNEISTKMSFAGT---VAWMAPEVIRNEPCSEKV 327
            ...|||||.:.|.|:..|.:||::|||.||.... .|..:.||.   :.|.|||.:.....|.|.
 Frog   384 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKS 447

  Fly   328 DIWSYGVVLWEMLTCEI-PYKDVDSSAIIWGVGNNSLKLLVPSTCPEGFKLLVKLCWKSKPRNRP 391
            |:|::||:|||:.|..: ||..:|.|. ::.:.....::..|..|||....|::.||:..|.:||
 Frog   448 DVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCPEKVYELMRECWQWSPLDRP 511

  Fly   392 SFRQILSHLDIAGPELLRKTEKQYFET---QKSWKEEVRSHLKEITQNG-----TNIHKYEQDLI 448
            ||.:|  |.|              |||   :.|..:||.   ||:.:.|     :|:.:..:...
 Frog   512 SFAEI--HQD--------------FETMFQESSISDEVE---KELGKKGLKVTVSNLLQAPELPT 557

  Fly   449 KRRTAEWRHAQDIRMVYEDKLQKTNQLFFELSECMSQLQEKEKEIAERE--------RKLPGSGY 505
            |.|..        |.|.|.|        .|.:|..|.....|.::.|.|        ||..|:| 
 Frog   558 KTRIT--------RRVPESK--------DENAETASVRAAGELDVFEPESAVSPLLPRKERGAG- 605

  Fly   506 KPNRRFGNTIRKMQHYRRRLNPAPAAIQQQSTTPDPETTPESPVKCMLYAQLDSNCQPKSYLANI 570
                                         ....||                 |....||....|:
 Frog   606 -----------------------------DGVLPD-----------------DDRLLPKDKKTNL 624

  Fly   571 IPSSGLGAPMPNKNKKVFRHRRNASGSFGAPPKYSPT-RDRRYQSEPENRKVQLVERQTQTDAMD 634
            ..|:           .:.|.::||.    .|||.|.: ||....||         .|.|..:..:
 Frog   625 FFST-----------LIKRKKKNAP----TPPKRSSSFRDMEGHSE---------RRSTDGEGKE 665

  Fly   635 VSETDISPSAEAPRSQPIDVPVPNHRQLPLQLQRVQKIAQAQARARSGSTSSAAGAVN------- 692
            .:..|:..:.                          |::.......:||...:.|.::       
 Frog   666 ANGGDLLDTF--------------------------KLSTNGTALSNGSIQGSTGFLSSQWKKSS 704

  Fly   693 -----PACPSNGNSLSTSELTYQDACSS---PDQLIDDVMNS---NERLDMTECCSDNENLERLG 746
                 .|.||...::.::...:..:||:   |....|....|   ...:..:.|..|....:.|.
 Frog   705 TMTGRQASPSEEETICSTSKRFLRSCSASCMPHGAKDTEWKSVTLPREITSSRCLLDTPGSDSLK 769

  Fly   747 RKVIEFINENRLSIQSNTNSVSNADNGNGGASPLE-------------LRESGNSPCLSRCSSTH 798
            :       ..:.::.....:.|..:...|..:|..             .:::..||..|..|.|.
 Frog   770 K-------AEKPALPRKRGNESKPEGTRGTVTPPPRLPKKCEDPNDEVFKDADPSPNSSPPSLTP 827

  Fly   799 SKRRKHPLGDNPNGS-------------SIGNANGESHEQDSWSDEEGETTDYKYALRRRSIGRQ 850
            ...|:.|.|  |.|:             |:.:..|.|.:|.|::.:    ::.:..|||.... :
 Frog   828 KLLRRKPAG--PAGAPLQKEEASNIRLGSVNSDTGPSTKQTSFAGK----SEAELRLRRPKTS-E 885

  Fly   851 PIARG----MRPRRSYKAPLSQKIAIHKRNVVIVSDEEENTSEYSHSPSSQHST--------LES 903
            |..:.    ::.:.|...|||        ::........|..:.:..||..|.|        |.|
 Frog   886 PATKDKVKVLKVKPSPPLPLS--------SIGSSPSASSNLGKAAKPPSQSHDTSPSEPKHKLTS 942

  Fly   904 NTDIADMKKTQATSTSSN------SYSEPEDDSSDS------SDEEQGNRPTEAKAEGPALPMGA 956
            .||  ::.||......|:      |.|:|:.....|      .|:.|.:.|:.:.:.. .:|:.:
 Frog   943 QTD--ELSKTPPPVPDSSKKPVLLSSSKPQVTGKLSGGMVAGGDQSQPSAPSSSSSTA-FVPLIS 1004

  Fly   957 VRSS 960
            .|.|
 Frog  1005 TRVS 1008

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wndNP_649137.3 STKc_MAP3K12_13 167..403 CDD:270961 92/251 (37%)
abl1XP_002936228.2 SH3_Abl 92..145 CDD:212784
SH2_ABL 150..243 CDD:198189
PTKc_Abl 262..524 CDD:270645 99/281 (35%)
F_actin_bind 1003..1128 CDD:471692 2/6 (33%)
Blue background indicates that the domain is not in the aligned region.

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