DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wnd and abl2

DIOPT Version :10

Sequence 1:NP_649137.3 Gene:wnd / 40143 FlyBaseID:FBgn0036896 Length:977 Species:Drosophila melanogaster
Sequence 2:XP_002937405.1 Gene:abl2 / 100487790 XenbaseID:XB-GENE-6459814 Length:1100 Species:Xenopus tropicalis


Alignment Length:975 Identity:212/975 - (21%)
Similarity:346/975 - (35%) Gaps:272/975 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 CMKPVLSFIGKTGVIEVKSQRSEDWQIPFESITELEWLGSGAQGAVFSGRLK--NETVAVKKVKE 192
            |.||.:     .||    |...:.|::....||....||.|..|.|:.|..|  |.|||||.:||
 Frog   255 CNKPTV-----YGV----SPIHDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYNLTVAVKTLKE 310

  Fly   193 --------LKETDIKHLRKLDHENIIKFKGVCTQSPVFCIIMEFCPYGPLQNILKE---EQVMLP 246
                    |||..:  ::::.|.|:::..||||..|.|.|:.|:..||.|.:.|:|   |:|...
 Frog   311 DTMEVEEFLKEAAV--MKEIKHPNLVQLLGVCTLEPPFYIVTEYMHYGNLLDYLRECNREEVTAV 373

  Fly   247 SRLVSWSKQIALGMQYLHSHKIIHRDLKSPNILISTNEVVKISDFGTSREWNEISTKMSFAGT-- 309
            . |:..:.||:..|:||.....|||||.:.|.|:..|.|||::|||.||.... .|..:.||.  
 Frog   374 V-LLYMATQISSAMEYLERKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTG-DTYTAHAGAKF 436

  Fly   310 -VAWMAPEVIRNEPCSEKVDIWSYGVVLWEMLTCEI-PYKDVDSSAIIWGVGNNSLKLLVPSTCP 372
             :.|.|||.:.....|.|.|:|::||:|||:.|..: ||..:|.|. ::.:.....::..|..||
 Frog   437 PIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYDLLEKGYRMEQPEGCP 500

  Fly   373 EGFKLLVKLCWKSKPRNRPSFRQILSHLDIAGPELLRKTEKQYFET---QKSWKEEVRSHLKEIT 434
            .....|::.||:..|.:||||.:  :|              |.|||   ..:..|||...|....
 Frog   501 PKVYELMRACWQWNPSDRPSFSE--TH--------------QAFETMFHDSNINEEVAEELGRTA 549

  Fly   435 QNGTNIHKYEQDLIKRRTAEWRHAQDIRMVYEDKL----QKTNQLFFELSECMSQLQEKEKEIAE 495
            ...:::.                       |:.:|    .|:..|               |:.||
 Frog   550 VTSSSVS-----------------------YQCRLPMLPSKSRTL---------------KKKAE 576

  Fly   496 RERKLPGSGYKPNRRFGNTIRKMQH-----------YRRRLNPAPAAI----QQQSTTPD----- 540
            .:..:.|:|...:....::...:.|           .|::.:.:|:::    ::.:.|.|     
 Frog   577 NKENIEGTGDSSDNSTSSSTPGLLHGSPVASGSPALPRKQRDKSPSSLLGDTKETTFTRDRKGGF 641

  Fly   541 ------PETTPESPVKCMLYAQLDSNCQPKSYLANIIPS-------------------------- 573
                  .::.|:.|.:...:.::::....:..|...:||                          
 Frog   642 FSSFMKKKSAPQPPKRSSSFREMENQPHKRPELTGELPSFQQLDSLDSPASPGSHKCYGGGSQRS 706

  Fly   574 -------SGLGAP--------MPNKNKKVFRHRRNASGSFGAPPK-------------YSPTRDR 610
                   .|:|..        .|...||.|..|...|||.|..||             ..|.:||
 Frog   707 FPPEDVIGGIGGGWTGISGFFTPRLIKKTFGLRTGKSGSSGEEPKPFPRSNSTSSMSPAVPEQDR 771

  Fly   611 RYQSEPEN---RKVQLVERQTQTDAMDVSETDISPSAEAPRSQPIDVPVPNHRQLPLQLQRVQKI 672
            ...:.|.|   .||||....:.:...:.|:.|:..|.       :::.....|..|..|.|. .:
 Frog   772 LSMTLPRNCHRTKVQLDRTTSISSQPEESQHDLQRSG-------LEIQPVRDRVKPKMLPRT-GV 828

  Fly   673 AQAQARARSGS---------TSSAAGAVNPAC----------PSNGNSLSTSELTYQDACSSPDQ 718
            ::.....|:|:         |..|..|.:.|.          ||..|:.:..:|...|:.....:
 Frog   829 SERNGGLRTGADEKSSPNKHTGGATSAFSTAAHNHKVPVLISPSPRNASTEVQLVGMDSLGHTFK 893

  Fly   719 LIDDVMNSNERLDMTECCSDNENLERLGRKVIEFINENRLSIQSNTNSVSNADNGNGGASPLELR 783
            |:      .|.:..|....|..:..||..|.......|...:|                 |.:..
 Frog   894 LL------QEHVPPTGSERDRPSHRRLKPKCAPPPPPNLRLLQ-----------------PPQAE 935

  Fly   784 ESGNS----PCLSRCSSTHSKRRKHPLGDNPNGSSIGNANGESHEQDSWSDEEGETTDYKYALRR 844
            ::..:    |||.|.:.........|...|..|.....|.|                        
 Frog   936 DTATAAPTLPCLERTTKPSRPMLPPPPSVNQTGKLSNGAAG------------------------ 976

  Fly   845 RSIGRQPIARGMRPRRSYKAPLSQKIAIHKRNVVIVSDEEENTSEYSHSPSSQHSTLESNTDIAD 909
              :||..:.:..:|.....|....|.|: .:...::||........|....:.|..|:..|...|
 Frog   977 --VGRSVLRKPKQPTERVPAEKISKEAL-LQCAGLLSDALALPQPNSQLVDTGHQLLDYCTGYVD 1038

  Fly   910 -MKKT-------QATSTSSNSYSEPEDDSSDSSDEEQGNRPTEAKAEGPALP--MGAVRS-SDII 963
             :.:|       :|.|....|..|.:..|:.|     |...|......|.|.  :..|:. ||::
 Frog  1039 SISQTRNKFAFREAVSRLEVSLQELQVSSAGS-----GGASTAPPGANPVLNHLLSCVQEISDVV 1098

  Fly   964  963
             Frog  1099  1098

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wndNP_649137.3 STKc_MAP3K12_13 167..403 CDD:270961 90/252 (36%)
abl2XP_002937405.1 SH3_Abl 100..153 CDD:212784
SH2_ABL 158..251 CDD:198189
PTKc_Abl 270..532 CDD:270645 97/282 (34%)
F_actin_bind 984..1100 CDD:471692 25/121 (21%)
Blue background indicates that the domain is not in the aligned region.

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