DRSC/TRiP Functional Genomics Resources

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Protein Alignment wnd and ripk3

DIOPT Version :10

Sequence 1:NP_649137.3 Gene:wnd / 40143 FlyBaseID:FBgn0036896 Length:977 Species:Drosophila melanogaster
Sequence 2:XP_001343827.1 Gene:ripk3 / 100004555 ZFINID:ZDB-GENE-071115-4 Length:433 Species:Danio rerio


Alignment Length:432 Identity:111/432 - (25%)
Similarity:188/432 - (43%) Gaps:77/432 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 LGSGAQGAVFSGR--LKNETVAVKKV--KELKETDIKHLRKL----DHENIIKFKGVC------T 217
            :|||..|.:|..|  |....||||.:  ||...:..:...:|    .:.|:::..||.      .
Zfish    24 VGSGGFGQIFRARHTLWGTDVAVKLLHYKEGSASSAQREAELMFDAGNSNVVRVLGVYEGRLGDP 88

  Fly   218 QSPVFC-IIMEFCPYGPLQNILKEEQVMLPSRL-VSWSKQIALGMQYLH--SHKIIHRDLKSPNI 278
            |.|:.| :::||...|.|:::|:......|..| :..:.|::|||.:||  :..|:|.|||..|:
Zfish    89 QRPLQCGLVLEFLARGSLEDLLQRLAAPPPCALALRMALQVSLGMNFLHQLTPPILHLDLKPSNV 153

  Fly   279 LISTNEVVKISDFGTSREWNEISTKMSF-----AGTVAWMAPEVIRN---EPCSEKVDIWSYGVV 335
            |:|.:...||:|||.||....:......     .||:::|.||.:::   :| |:..|::|||::
Zfish   154 LLSDSLDAKITDFGLSRVAENVCKYTGVNDEDEGGTLSYMPPEALQSSSYKP-SKAFDVYSYGIL 217

  Fly   336 LWEMLTCEIPYKDVDSSAIIWGVGNNSLKLLVPSTC--PEGFKLLVKL---CWKSKPRNRPSFRQ 395
            ||.::|.:.||..|.||.:.:.:.......|....|  .||...|:||   ||..:|..||||..
Zfish   218 LWSIITGKEPYSGVQSSLVRFRIPLGDRPDLASVDCSETEGLDELLKLMMQCWDQEPHRRPSFLD 282

  Fly   396 ILSHLD-IAGPELLRKTEKQYFETQKSWKEEVRSHLKEITQNGTNIHKYEQDLIKRRTAEWRHAQ 459
            .:..:. |......|..:..:...::...:|:.|.|:.:.             |.|:.......|
Zfish   283 CVHAITAIYTMHARRLNDDVHDVLEQLQDDEICSSLRSVQ-------------ISRKPHREVDPQ 334

  Fly   460 DIRMV------------YEDKLQKTNQLFFELSECMSQLQEKEKEIAERERKL--PGSGYKPNRR 510
            |:..|            |.:.:||         ||..:.......|.:.:|:.  |......:..
Zfish   335 DLSCVTGPAPQQETAAAYTETVQK---------ECSPRAAPPVGAIRKTQRQTSNPAVQVSMSNV 390

  Fly   511 FG------NTIRKMQHYRRRLNPAPAAIQQQSTTPDPETTPE 546
            ||      |::...|..|:|...||:|:...|:  .|:..|:
Zfish   391 FGVQIGNNNSMNITQKPRQRHRTAPSAVNTHSS--HPQNPPQ 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wndNP_649137.3 STKc_MAP3K12_13 167..403 CDD:270961 81/267 (30%)
ripk3XP_001343827.1 Protein Kinases, catalytic domain 24..285 CDD:473864 81/261 (31%)

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