DRSC/TRiP Functional Genomics Resources

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Protein Alignment wnd and ripk3

DIOPT Version :9

Sequence 1:NP_649137.3 Gene:wnd / 40143 FlyBaseID:FBgn0036896 Length:977 Species:Drosophila melanogaster
Sequence 2:XP_001343827.1 Gene:ripk3 / 100004555 ZFINID:ZDB-GENE-071115-4 Length:433 Species:Danio rerio


Alignment Length:432 Identity:111/432 - (25%)
Similarity:188/432 - (43%) Gaps:77/432 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 LGSGAQGAVFSGR--LKNETVAVKKV--KELKETDIKHLRKL----DHENIIKFKGVC------T 217
            :|||..|.:|..|  |....||||.:  ||...:..:...:|    .:.|:::..||.      .
Zfish    24 VGSGGFGQIFRARHTLWGTDVAVKLLHYKEGSASSAQREAELMFDAGNSNVVRVLGVYEGRLGDP 88

  Fly   218 QSPVFC-IIMEFCPYGPLQNILKEEQVMLPSRL-VSWSKQIALGMQYLH--SHKIIHRDLKSPNI 278
            |.|:.| :::||...|.|:::|:......|..| :..:.|::|||.:||  :..|:|.|||..|:
Zfish    89 QRPLQCGLVLEFLARGSLEDLLQRLAAPPPCALALRMALQVSLGMNFLHQLTPPILHLDLKPSNV 153

  Fly   279 LISTNEVVKISDFGTSREWNEISTKMSF-----AGTVAWMAPEVIRN---EPCSEKVDIWSYGVV 335
            |:|.:...||:|||.||....:......     .||:::|.||.:::   :| |:..|::|||::
Zfish   154 LLSDSLDAKITDFGLSRVAENVCKYTGVNDEDEGGTLSYMPPEALQSSSYKP-SKAFDVYSYGIL 217

  Fly   336 LWEMLTCEIPYKDVDSSAIIWGVGNNSLKLLVPSTC--PEGFKLLVKL---CWKSKPRNRPSFRQ 395
            ||.::|.:.||..|.||.:.:.:.......|....|  .||...|:||   ||..:|..||||..
Zfish   218 LWSIITGKEPYSGVQSSLVRFRIPLGDRPDLASVDCSETEGLDELLKLMMQCWDQEPHRRPSFLD 282

  Fly   396 ILSHLD-IAGPELLRKTEKQYFETQKSWKEEVRSHLKEITQNGTNIHKYEQDLIKRRTAEWRHAQ 459
            .:..:. |......|..:..:...::...:|:.|.|:.:.             |.|:.......|
Zfish   283 CVHAITAIYTMHARRLNDDVHDVLEQLQDDEICSSLRSVQ-------------ISRKPHREVDPQ 334

  Fly   460 DIRMV------------YEDKLQKTNQLFFELSECMSQLQEKEKEIAERERKL--PGSGYKPNRR 510
            |:..|            |.:.:||         ||..:.......|.:.:|:.  |......:..
Zfish   335 DLSCVTGPAPQQETAAAYTETVQK---------ECSPRAAPPVGAIRKTQRQTSNPAVQVSMSNV 390

  Fly   511 FG------NTIRKMQHYRRRLNPAPAAIQQQSTTPDPETTPE 546
            ||      |::...|..|:|...||:|:...|:  .|:..|:
Zfish   391 FGVQIGNNNSMNITQKPRQRHRTAPSAVNTHSS--HPQNPPQ 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wndNP_649137.3 STYKc 161..400 CDD:214568 81/263 (31%)
STKc_MAP3K12_13 167..403 CDD:270961 81/267 (30%)
ripk3XP_001343827.1 TyrKc 20..287 CDD:197581 81/263 (31%)
PKc_like 24..285 CDD:304357 81/261 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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