DRSC/TRiP Functional Genomics Resources

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Protein Alignment asf1 and asf1b

DIOPT Version :9

Sequence 1:NP_001189131.1 Gene:asf1 / 40141 FlyBaseID:FBgn0029094 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_001004974.1 Gene:asf1b / 448404 XenbaseID:XB-GENE-1003005 Length:200 Species:Xenopus tropicalis


Alignment Length:198 Identity:125/198 - (63%)
Similarity:153/198 - (77%) Gaps:3/198 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAKVHITNVVVLDNPSSFFNPFQFELTFECIEELKEDLEWKMIYVGSAESEEHDQVLDTIYVGPV 65
            ||||.|.|:||||||..|.||||||:||||||:|.:|||||:||||||||||:|||||::.||||
 Frog     1 MAKVQILNMVVLDNPCPFHNPFQFEITFECIEDLPDDLEWKIIYVGSAESEEYDQVLDSVLVGPV 65

  Fly    66 PEGRHIFVFQADPPDVSKIPEPDAVGVTIVLLTCSYRGQEFVRVGYYVNNDYADPEMRENPPTKP 130
            |.|||:||||||.|:.|.|||.||||||:||:||:||||||:||||||||:|:|||:|||||.||
 Frog    66 PAGRHMFVFQADAPNSSLIPESDAVGVTVVLITCTYRGQEFIRVGYYVNNEYSDPELRENPPLKP 130

  Fly   131 LFEKLTRNILASKPRVTRFKINWDYGHINGNGNGVEN--GHQDEMATDGPSTSEAASAVIHPEDD 193
            .|.:|.||||||.||||||.|||:... ......:||  ...:.|.....:.|:..:|.::|..:
 Frog   131 HFGQLQRNILASNPRVTRFHINWECAS-EAKMEDIENVDPASNAMLPPNCAPSKGLAAALNPIPE 194

  Fly   194 NSL 196
            ||:
 Frog   195 NSM 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
asf1NP_001189131.1 ASF1_hist_chap 1..154 CDD:282572 116/152 (76%)
asf1bNP_001004974.1 ASF1_hist_chap 1..154 CDD:368085 116/152 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 253 1.000 Domainoid score I2027
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8528
Inparanoid 1 1.050 256 1.000 Inparanoid score I3076
OMA 1 1.010 - - QHG54218
OrthoDB 1 1.010 - - D1334998at2759
OrthoFinder 1 1.000 - - FOG0001913
OrthoInspector 1 1.000 - - otm49247
Panther 1 1.100 - - LDO PTHR12040
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R94
SonicParanoid 1 1.000 - - X1264
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1313.110

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