DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment asf1 and asf1

DIOPT Version :10

Sequence 1:NP_524163.1 Gene:asf1 / 40141 FlyBaseID:FBgn0029094 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_588267.1 Gene:asf1 / 2539568 PomBaseID:SPCC663.05C Length:262 Species:Schizosaccharomyces pombe


Alignment Length:249 Identity:97/249 - (38%)
Similarity:139/249 - (55%) Gaps:56/249 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAKVHITNVVVLDNPSSFFNPFQFELTFECIEELKEDLEWKMIYVGSAESEEHDQVLDTIYVGPV 65
            |:.|:|.:|.||:||:.|.:|::||:||||:|.||.|||||:.|||||.|:.:||:|||:.|||:
pombe     1 MSIVNILSVNVLNNPAKFSDPYKFEITFECLEPLKSDLEWKLTYVGSATSQSYDQILDTLLVGPI 65

  Fly    66 PEGRHIFVFQADPPDVSKIPE-PDAVGVTIVLLTCSYRGQEFVRVGYYVNNDYA--------DPE 121
            |.|.:.|||:||||::..:|: .|.:|||::||:|:|...|||||||||||:..        |.|
pombe    66 PIGINKFVFEADPPNIDLLPQLSDVLGVTVILLSCAYEDNEFVRVGYYVNNEMEGLNLQEMDDAE 130

  Fly   122 MRENPPTKPLFEKLTRNILASKPRVTRFKINWDYGHI---------------------------- 158
            :::   .|....|:.|:|||.|||||||.|.||....                            
pombe   131 IKK---VKVDISKVWRSILAEKPRVTRFNIQWDNPDFDDAPPVQPDADEEEEEEEADEMEEEFDE 192

  Fly   159 ------------NGNGNGVENGHQDEMATDGPSTSEAASAVI---HPEDDNSLA 197
                        :|:|:|..:| ..|...||..:.|.....|   ..|::::||
pombe   193 EGEGDEEEEEEDDGDGDGEGDG-DGEGENDGKGSEEEEEEEIDIEEEEEESALA 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
asf1NP_524163.1 ASF1_hist_chap 1..154 CDD:461412 83/161 (52%)
asf1NP_588267.1 COG5137 1..>174 CDD:227466 90/221 (41%)

Return to query results.
Submit another query.