DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(3)76BDm and Trappc8

DIOPT Version :9

Sequence 1:NP_001262058.1 Gene:l(3)76BDm / 40140 FlyBaseID:FBgn0260655 Length:1319 Species:Drosophila melanogaster
Sequence 2:XP_017173500.1 Gene:Trappc8 / 75964 MGIID:2443008 Length:1453 Species:Mus musculus


Alignment Length:1358 Identity:407/1358 - (29%)
Similarity:631/1358 - (46%) Gaps:216/1358 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 NARDIIRNIFSPLIGVLSSPQADEICHRNNLSFVELLQPFAKLPNDAHFRDVSGTSVSVRGLRLN 74
            :.:::|.:.|.|.:..|.|.:|:.:...|:|||.|||:||::|.::.|.||.:.....::.|::.
Mouse     7 SVQELIPDSFVPCVAALCSDEAERLTRLNHLSFSELLKPFSRLTSEVHMRDPNNQLHIIKNLKIA 71

  Fly    75 FCDVDWRPPQTILARKMLNESVTNAHNDKTRLATI--AG-IDLELPTSEPWFEQWRETFLTVQFP 136
            ..::..:|||.....|:||:.|:.:...:..:|.:  || .||.:..:.||||.:|||||.....
Mouse    72 VSNIVTQPPQPGAIGKLLNDVVSGSQPAEGLVANVITAGDYDLNISATTPWFESYRETFLQSMPA 136

  Fly   137 ADHEFTRHLLSCLLVLSSADPQIVETAHKLGQRVQQMQSITPQKLPKWFHPTEVLNSYVVLHEAS 201
            :||||..|.|:|:||.||.:.:.:|...||.|...::|.......||||.| ..|..||:||:.:
Mouse   137 SDHEFLNHYLACMLVASSGEAEPMEQFSKLSQEQHRIQHNNDYSYPKWFIP-NTLKYYVLLHDVT 200

  Fly   202 QGDLSKAQQGFELLKSTFGDSKCFLVSINSMDSQGAA--EVPDHWATFIKR----QPKSDPNLPS 260
            .||..:|:..:|.:|..:|...|:|:.|||.....|:  ::||.|:.::::    ..:|..:.|.
Mouse   201 SGDEQRAESIYEEMKQKYGTQGCYLLKINSRAPNRASDEQIPDPWSQYLQKNSIQNQESYEDGPC 265

  Fly   261 TDLSAPKSPQEAVSVISMPAMQMSQLLEGVSAQDSDLAM--------LHPLS-------PMQESA 310
            |..|:..|....:|            |:|:   |:::.:        :|||.       |.....
Mouse   266 TMTSSKNSDSNLLS------------LDGL---DNEVKVDGLPNNFRIHPLQIDQCGDPPNNTDG 315

  Fly   311 TEAINSKFSISSESIASQTINPNVWGNELEADAPHGGCLTSRDIDNLRHFVQDYAVRALIPYIEH 375
            :|: .|..|:.....||..:             ..|.|||..|.|.:|.|:|::..|.|:|:||.
Mouse   316 SES-KSASSVHETKKASTAV-------------IRGACLTLTDHDRIRQFIQEFTFRGLLPHIEK 366

  Fly   376 LVAILAEGVTNKKGVSKSLLSATKRWFVTSK-PGAGAN---NQNAVIYTNESAELQTRKLGDLYF 436
            .:..|.:.:.::||:|:||.||||:||..|| |....|   |.:.::|..|:.|||.||:.||.|
Mouse   367 TIRQLNDQLISRKGLSRSLFSATKKWFSGSKVPEKSINELKNTSGLLYPPEAPELQIRKMADLCF 431

  Fly   437 MFGHYNLAFQSYHQAKRDFNADSAWQYYAGALEMAALSAFMLGTAQRK-TYDYMEDAIVCYLTVC 500
            :..||:||:..||.||:||..|.|..|.||||||||:|||:...|.|. ...||:.||..|..:|
Mouse   432 LVQHYDLAYSCYHTAKKDFLNDQAMLYAAGALEMAAVSAFLQPGAPRPYPAHYMDTAIQTYRDIC 496

  Fly   501 KLQQFATRATLLSMECLKTARLYSEVAKQLIRMTNE-------ESDLRSALLLEQAAYCFLVTQP 558
            |....|.|..|||.|.||:...|||.|..|||:|:|       :|||||||||||||:||:..:.
Mouse   497 KNMVLAERCVLLSAEILKSQSKYSEAAALLIRLTSEQNTWKGLDSDLRSALLLEQAAHCFINMKS 561

  Fly   559 PMHRKYAFHIVLAGNRYSRAGQRKHAYRCYRQAYQVFQKREWSLAEDHIQYTVAKQAYMLKQLEE 623
            ||.||||||::|||:|:|:|||:|||.|||.||.||::.:.||||||||.:|:.:|:|.|:||:.
Mouse   562 PMVRKYAFHMILAGHRFSKAGQKKHALRCYCQAMQVYKGKGWSLAEDHINFTIGRQSYTLRQLDN 626

  Fly   624 ASRSFAHLLRPGSLQSAQQQTSFLKEYIQTQNELVKRSPELGLLPH-ALPQVVQSSVRVLTLVQS 687
            |..:|.|:|...|.|||.||.:||:||:.....:.:.||: |.||. .||.:..|:.||......
Mouse   627 AVSAFRHILINESKQSAAQQGAFLREYLYVYKNVNQLSPD-GPLPQLPLPYINSSATRVFFGHDR 690

  Fly   688 PSAVAPHVPATNIDINSNLTAD-EPIWNKIEEMLVITAANNK---PFVFKPSRYLYTKQQPALET 748
            ..|......||:|.::....:: ...|.::||.:|..|  ||   |..|.|::|...........
Mouse   691 RPADGEKQAATHISLDQEYDSESSQQWRELEEHVVAVA--NKGVIPSSFYPTQYCLNSYSDNSRF 753

  Fly   749 PVAVQGEPIELAVTLSNSVQCRIALSEIDLLWKLTLDNDEVLSNACTYEESSDSANK-------- 805
            |:||..|||.:.|...|.::..:.||::.||||.               :..|::.|        
Mouse   754 PLAVVEEPITVEVAFRNPLKVPLLLSDLSLLWKF---------------QPKDASGKDIEKVKER 803

  Fly   806 -IAVGAAIKTSCMASIKLAEQAEETLHFKLTPKLTGRLSILGVVCRVAA----------GADP-- 857
             ......|.|..::...:..:..:....||.|...|.|.|||||..:..          ||.|  
Mouse   804 VTGEPEMIGTEVISEFLINSEESKVARLKLFPHHIGELHILGVVYNLGTIQGSGTVDGIGALPGC 868

  Fly   858 -------AASLLGTLQFETQKIRPHNAKQSSQTVM---DNRLTIKLVPQLPAMNVSFTPVPNRLL 912
                   :.|:.|....|.|..|.:|.|:...:|.   |.||...:..::|.:.|.|...|..||
Mouse   869 HTGKHSLSMSVRGRQDLEIQGPRLNNTKEEKTSVKYGPDRRLDPIVTEEMPLLEVFFIHFPTGLL 933

  Fly   913 AGEIVPVHVTLRNMGIAPIEEIYLGCDNPRCVSLLDQHSQMPLAMMSSLRNLSNDKLVKDKEI-- 975
            .|||...:|...|:...|:..:.:....|...:.....:.:.....|:..|.|..|.|.....  
Mouse   934 CGEIRKAYVEFVNVSKCPLTGLKVVSKRPEFFTFGGNTAALTPLSPSTSENCSAYKTVVTASPSL 998

  Fly   976 ----------------RGQRVYRL-LNRPGLAALDAQQVQTISLWVQAPHQAGPFTLRLLFYYSL 1023
                            .||::..: :..|....|....:| :.:|::.|.:.|...:..||||. 
Mouse   999 GTALVSTASSMDFGTGTGQQLEAIPVPLPDSVLLPGASIQ-LPMWLRGPDEEGVHEINFLFYYE- 1061

  Fly  1024 PTVANSPIK-YRLVRHIWQLQVESCLQADSTCVVSNAVTNELG------LDVNVRNQHAVEG--T 1079
             :|...|.| :|::||...:.....|...:|...||::.:|.|      :.|:|.|.:..|.  .
Mouse  1062 -SVKKQPKKRHRILRHTAVICTSRSLNVRATVCRSNSLEDEEGRGGNMLVFVDVENTNTSEAGVK 1125

  Fly  1080 EVYINSISLYSTEFKLNPDRLHIMNSMGVSPG--------QAGAQCLKSSICCNFQCRLLEK--E 1134
            |.::..:|..|..::|:       .|:.:|..        :.|..|.|:     .:|:..|.  :
Mouse  1126 EFHMVQVSSSSKHWQLH-------KSVNISENKDAKLASREKGKFCFKA-----VRCKQKEGGIQ 1178

  Fly  1135 TQEEY--KDI------------PSIKTLLHSRLSHLKILPAQHAQQVEQHMPPIHDPHSFLTNEE 1185
            :.|:|  .||            |.......|..|.||....|.:...|:|..         ..|.
Mouse  1179 SSEKYTFADIIFGNEQIISSASPCADFFYRSLSSELKKTQDQLSAYPEKHRE---------ATEG 1234

  Fly  1186 TVYFNTNISTEEFNASVADYVPHATLVLSW---------SALVAREEGQRLACGLHFI 1234
            .|......|..:.           ::|:.|         ||.|..:..|.:..|.|.:
Mouse  1235 AVRLVEKCSEVDL-----------SIVILWKVVHCGQQASAYVVEDNKQLILEGQHHV 1281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)76BDmNP_001262058.1 TRAPPC-Trs85 157..608 CDD:289508 187/483 (39%)
Trappc8XP_017173500.1 TRAPPC-Trs85 157..611 CDD:372281 187/483 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847345
Domainoid 1 1.000 309 1.000 Domainoid score I1334
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H40993
Inparanoid 1 1.050 525 1.000 Inparanoid score I1237
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55634
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004433
OrthoInspector 1 1.000 - - oto94166
orthoMCL 1 0.900 - - OOG6_102833
Panther 1 1.100 - - LDO PTHR12975
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1544
SonicParanoid 1 1.000 - - X5582
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.930

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