DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)76BDm and trpp-8

DIOPT Version :9

Sequence 1:NP_001262058.1 Gene:l(3)76BDm / 40140 FlyBaseID:FBgn0260655 Length:1319 Species:Drosophila melanogaster
Sequence 2:NP_491642.2 Gene:trpp-8 / 172217 WormBaseID:WBGene00018512 Length:1282 Species:Caenorhabditis elegans


Alignment Length:892 Identity:215/892 - (24%)
Similarity:360/892 - (40%) Gaps:204/892 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 SPLIGVLSSPQADEICHRNNLSFVEL---LQPFAKLPNDAHFRDVSGTSVSVRGLRLNFCDVDWR 81
            ||||.::||..:.:  |.:|..|..|   :.||..  ::...|:......:.:.:||:..|:.  
 Worm     7 SPLIALISSECSQK--HAHNRGFKSLSHFIFPFTS--HECQVREPIDNLKASQRIRLDIRDIS-- 65

  Fly    82 PPQTILARKMLNESVTNAHNDKTRLATIAGIDLELPTSEPWFEQWRETFLTVQFPADHEFTRHLL 146
            ....:|...:|...:..|      |.|...:...:       :.:|:.......|::||...|.|
 Worm    66 SDGHLLTLSVLPYVLIQA------LKTCTDVSQSI-------KLFRDVLARCSEPSEHESFGHYL 117

  Fly   147 SCLLVLSSADPQIVETAHKLGQRVQQMQSITPQKL-------PKWFHP-TEVLNSYVVLHEASQG 203
            :|:.|:|:.|...:....|:.|..|.:.:.|...:       |||..| .:....|::||: |:.
 Worm   118 ACIFVVSTEDENPLGEFSKMIQTQQTLYNTTSTLMIPGHCSTPKWAAPHAKTPRHYILLHD-SRS 181

  Fly   204 DLSKAQQGFELLK---STFGDSKCFLVSINSMDSQGAAEVPDHWATF-----IKRQPKSDPNLPS 260
            ..|..::..|||.   :|:|:..|.::.::| ||: :||:...|...     :..:...:.:..|
 Worm   182 PRSSTERRDELLAQMCATYGNDNCQMLQLDS-DSE-SAEMKGVWDEIDEFNDVLEKGLEEAHQHS 244

  Fly   261 TDLSAPKSPQEAVSVISMPAMQMSQLLEGVSAQDSDLAMLHPLSPMQESATEAINSKFSISSESI 325
            ||..|| .|                  .|.|.|.|      |.||....||        |||...
 Worm   245 TDAIAP-GP------------------NGASNQQS------PSSPTSSVAT--------ISSTMP 276

  Fly   326 ASQTINPN-------VWGNELE----ADAPHGGCLTSRDIDNLRHFVQDYAVRALIPYIEHLVAI 379
            |..:::||       ||.:..:    |||.....:.|:.:|           ..||||:|..:..
 Worm   277 AVGSVSPNSHPNSTVVWKSSKKLASLADAKAVQAILSKFLD-----------VCLIPYVEKEMRF 330

  Fly   380 LAEGVTNKKGVSKSLLSATKRWFVTSKPGAG---ANNQNAVIYTNESAELQTRKLGDLYFMFGHY 441
            |.|....|||:.||..| .||||     |:|   :|....:.|..:|:|:|||:|.||..|||..
 Worm   331 LYETAGQKKGIGKSFTS-MKRWF-----GSGTALSNMATPITYAWDSSEMQTRRLADLLLMFGFP 389

  Fly   442 NLAFQSYHQAKRDFNADSAWQYYAGALEMAALSAFMLGTAQRK------TYDYMEDAIVCYLTVC 500
            |.||:.|...|||..||.|...:|.||||..::   |.:||.:      ...|:|..:...:...
 Worm   390 NSAFEQYRGLKRDLEADKAMAAHAVALEMCCVA---LHSAQPQLNANQFMIKYLETPVSLLIEHA 451

  Fly   501 KLQQFAT--RATLLSMECLKTARLYSEVAKQLIRMTNEESDLRSALLLEQAAYCFLVTQPPMHRK 563
            |.:::.:  |......:......|:.|.|..|.::::.|.|...|:....||..|  .:..|.||
 Worm   452 KFRRYPSILRCAFNIADIYSDLGLHKEAALNLAKVSSIEGDHLVAVAQTLAAEQF--EKAGMGRK 514

  Fly   564 YAFHIVLAGNRYSRAGQRKHAYRCYRQAYQVFQKREWSLAEDHIQYTVAKQAYMLKQLEEASRSF 628
            .:||.|||.||:|.|.....::.|||.|...|.|:.|.:.::|:         .::.|||..:  
 Worm   515 ASFHRVLAANRFSNAAIPALSFDCYRLALPAFDKKHWGVLDEHL---------AVRLLEEGQK-- 568

  Fly   629 AHLLRPGSLQSAQQQTSFLKEYIQTQNELVKRSPELGLLPHALPQVVQSSVRVLTLVQSPSAVAP 693
                      :....|....|.|:   .||...|:|.      |.:  .:.|:.|:|.:.....|
 Worm   569 ----------AGVMTTDIASECIR---RLVAVCPKLS------PSL--QTERLRTIVNALDIYFP 612

  Fly   694 H----------VPATNIDINSNLTADEPIWNKIEE-----------MLVITAANNKPF-VFKPSR 736
            |          :|...::....:..:.|:||:|:|           :.|..||::..| ...|.|
 Worm   613 HRNEPVEMLTDIPKVEMETVKAIYGERPLWNEIDENEHQSVSSDGWITVERAAHHALFGASAPYR 677

  Fly   737 YL------YTKQQPALETPVAVQGEPIELAVTLSNSVQCRIALSEIDLLWKLTLDNDEVLSNACT 795
            .:      ::..|...|||.   ||...:.|.|:|.::..|.|..:.|                 
 Worm   678 GMQLVSDEHSDNQKIRETPA---GERFRVMVDLTNPLKIPIHLQNLRL----------------- 722

  Fly   796 YEESSDSANKIAVGAAIKT----SCMASIKLAEQAEETLHFKLTPKL 838
              ..||..|:..:..:.|:    ..:..::|..:..:|:...:.|::
 Worm   723 --SVSDIHNQSGIEGSEKSIPELGALEHLQLDPEETKTIELYVFPRV 767

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)76BDmNP_001262058.1 TRAPPC-Trs85 157..608 CDD:289508 137/488 (28%)
trpp-8NP_491642.2 TRAPPC-Trs85 128..558 CDD:289508 136/487 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165177
Domainoid 1 1.000 134 1.000 Domainoid score I3123
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55634
OrthoDB 1 1.010 - - D625387at2759
OrthoFinder 1 1.000 - - FOG0004433
OrthoInspector 1 1.000 - - oto19799
orthoMCL 1 0.900 - - OOG6_102833
Panther 1 1.100 - - LDO PTHR12975
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1544
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.890

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