DRSC/TRiP Functional Genomics Resources

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Protein Alignment PIG-F and kdsr

DIOPT Version :9

Sequence 1:NP_649134.3 Gene:PIG-F / 40139 FlyBaseID:FBgn0036893 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_957433.2 Gene:kdsr / 394114 ZFINID:ZDB-GENE-040426-853 Length:359 Species:Danio rerio


Alignment Length:84 Identity:17/84 - (20%)
Similarity:30/84 - (35%) Gaps:33/84 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 LLYAFICIILGAPVLGNYEQTFVLALLMTLLTVSPT------------VFLLGGGGALQVCFCEK 155
            ||..||.:::.|        .|::|.::.|..:||.            |.:.||...:..|.   
Zfish    22 LLLPFIMLLVVA--------AFIVAFVLLLYMISPLISPKPLKLNGAHVVVTGGSSGIGKCI--- 75

  Fly   156 PDFVTKCEDTALNLFKYNA 174
                      |:..:|:.|
Zfish    76 ----------AMECYKHGA 84

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PIG-FNP_649134.3 PIG-F <81..214 CDD:399588 17/84 (20%)
kdsrNP_957433.2 KDSR-like_SDR_c 59..295 CDD:187643 7/39 (18%)
adh_short 61..259 CDD:278532 7/37 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1750
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.030

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