DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PIG-F and KDSR

DIOPT Version :9

Sequence 1:NP_649134.3 Gene:PIG-F / 40139 FlyBaseID:FBgn0036893 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_002026.1 Gene:KDSR / 2531 HGNCID:4021 Length:332 Species:Homo sapiens


Alignment Length:77 Identity:22/77 - (28%)
Similarity:29/77 - (37%) Gaps:19/77 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 IILGAPVLGNYEQTFVLALLMTLLTVSPT--------VFLLGGGGALQVCF---CEKPD-FVT-- 160
            ::|.|..|    ..|||.|.|....:||.        |.:.||...:..|.   |.|.. |:|  
Human     2 LLLAAAFL----VAFVLLLYMVSPLISPKPLALPGAHVVVTGGSSGIGKCIAIECYKQGAFITLV 62

  Fly   161 -KCEDTALNLFK 171
             :.||..|...|
Human    63 ARNEDKLLQAKK 74

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PIG-FNP_649134.3 PIG-F <81..214 CDD:399588 22/77 (29%)
KDSRNP_002026.1 KDSR-like_SDR_c 32..268 CDD:187643 12/43 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1750
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.030

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