DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lon and LON1

DIOPT Version :9

Sequence 1:NP_730435.2 Gene:Lon / 40138 FlyBaseID:FBgn0036892 Length:1024 Species:Drosophila melanogaster
Sequence 2:NP_568490.4 Gene:LON1 / 832744 AraportID:AT5G26860 Length:985 Species:Arabidopsis thaliana


Alignment Length:1078 Identity:444/1078 - (41%)
Similarity:609/1078 - (56%) Gaps:244/1078 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ARAIRVRPMMRGIASSSVWNRNRPIQSSLMQYCRDRSLRLQRLHGAN-----LMVQRFYSRKRDD 62
            :|...:.|:.|.:.||       |::|.|.:       .|.::.|.|     |..:.|:.  .:.
plant    55 SRVHHLTPVSRVVGSS-------PVESPLFK-------ALSQITGWNRRSTSLGHRAFFC--SEP 103

  Fly    63 SNGDIIMGPDLMS-DQDTHLPATVAVPDVWPHVP---------LLAMRKNPLFPRFMKIVEVSNP 117
            :||:.....:..: :.|:.:..:.:...:.|..|         .|.:...||||.|...:.|.:|
plant   104 TNGEAAAEAETKAVESDSEVSDSKSSSAIVPTNPRPEDCLTVLALPVPHRPLFPGFYMPIYVKDP 168

  Fly   118 IIMDLLRRKVKLNQPYVGVFLKK----------TDGE--------EELITNLNDVYNLGTFAQIQ 164
            .::..|:...:...||.|.||.|          ||.|        :||:..|::|   ||.|||.
plant   169 KVLAALQESRRRQAPYAGAFLLKDDPSADSSSSTDAEKNINELKGKELLNRLHEV---GTLAQIS 230

  Fly   165 ELQDLGDKLRMVVVAHRRIRITGQVVEDVPPPKPVKMTTLHYPLFNIKLQIPAEDQSTDQADAAP 229
            .:|  ||  ::::|.|||:||...|.|                                      
plant   231 SIQ--GD--QVILVGHRRLRIKEMVSE-------------------------------------- 253

  Fly   230 IKSRSDPARKPRGRIPRSRTGKSRESAAAEELIQNQTLEPPLKSGKVESSSLPKPPTEEKIVEPE 294
                                                                          || 
plant   254 --------------------------------------------------------------EP- 255

  Fly   295 TGAKENVNQSAPSAQPVLIVEVENVK-QPIYKQTEEVKALTQEIIKTLRDIITMNPLYRESLQQM 358
                             |.|:|:::| .|.....:.|||.:.|:|.||||::..:.|:|:.:|. 
plant   256 -----------------LTVKVDHLKDNPFDMDDDVVKATSFEVISTLRDVLKTSSLWRDHVQT- 302

  Fly   359 LHQNQRVVDNPI-YLCDLGASLSAGEPAELQKILEETDIPERLQLALTLLKKELELSRLQQKIGR 422
              ..|.:.|... .|.|.||::......:.|::|||.|:.:||:|.|.|:|||:|:|::|:.|.:
plant   303 --YTQHIGDFTYPRLADFGAAICGANRHQAQEVLEELDVHKRLRLTLELMKKEMEISKIQETIAK 365

  Fly   423 EVEEKVKQQHRKYILQEQLKVIKKELGIEKDDKDAIGEKYREKL---KDKVVPEAIMTVIDEELT 484
            .:|||:..:.|:|:|.||||.||||||:|.|||.|:..|::|::   |:| :|..::.||:||||
plant   366 AIEEKISGEQRRYLLNEQLKAIKKELGVETDDKSALSAKFKERIEPNKEK-IPAHVLQVIEEELT 429

  Fly   485 KLNFLESHSSEFNVTRNYLDWLTSLPWGVISTENLCLEKATETLNDDHYGMEDIKKRILEFIAVS 549
            ||..||:.|||||||||||||||.||||..|.||..:.:|...|::||||:.|:|:||||||||.
plant   430 KLQLLEASSSEFNVTRNYLDWLTILPWGNYSNENFDVARAQTILDEDHYGLSDVKERILEFIAVG 494

  Fly   550 SLKGSTQGKILCFHGPPGVGKTSIAKSIARALNREYFRFSVGGMTDVAEIKGHRRTYVGAMPGKL 614
            .|:|::||||:|..||||||||||.:||||||||::|||||||:.|||||||||||||||||||:
plant   495 RLRGTSQGKIICLSGPPGVGKTSIGRSIARALNRKFFRFSVGGLADVAEIKGHRRTYVGAMPGKM 559

  Fly   615 IQCLKKTKIENPLVLIDEVDKIGKGYQGDPSSALLELLDPEQNANFLDHYLDVPVDLSRVLFICT 679
            :||||.....||||||||:||:|:|:.|||:||||||||||||||||||||||.:|||:|||:||
plant   560 VQCLKSVGTANPLVLIDEIDKLGRGHAGDPASALLELLDPEQNANFLDHYLDVTIDLSKVLFVCT 624

  Fly   680 ANVIDTIPEPLRDRMELIEMSGYVAEEKIAIARQYLMPQAMKDCGLTDKHINISEDALNMLIRSY 744
            |||||.||.||.||||:|.::||:.:||:.|||.||...|..|||:..:.:.:|:.||..||.:|
plant   625 ANVIDMIPNPLLDRMEVISIAGYITDEKVHIARDYLEKTARGDCGVKPEQVEVSDAALLSLIENY 689

  Fly   745 CRESGVRNLQKHIEKVIRKVAFRVVKKEG------------------------------------ 773
            |||:|||||||.|||:.||:|.::| :||                                    
plant   690 CREAGVRNLQKQIEKIYRKIALKLV-REGAVPEEPAVASDPEEAEIVADVGESIENHTVEENTVS 753

  Fly   774 ----------------EHFPVNADNLTTFLGKQIFSSDRMYATTPVGVVMGLAWTAMGGSSLYIE 822
                            |...::..||..::||.:|.::::|..||||||||||||:||||:||||
plant   754 SAEEPKEEAQTEKIAIETVMIDESNLADYVGKPVFHAEKLYEQTPVGVVMGLAWTSMGGSTLYIE 818

  Fly   823 TSRRHIRQGAKTDPNTVAGSLHITGNLGDVMKESAQIALTVARNFLYSLEPNNLFLEQEHIHLHV 887
            |:.....:|        .|.|:|||.||||||||||||.||||..:...||.|.|.....:||||
plant   819 TTVVEEGEG--------KGGLNITGQLGDVMKESAQIAHTVARKIMLEKEPENQFFANSKLHLHV 875

  Fly   888 PEGATPKDGPSAGITIITALVSLATGKPVRQDIAMTGEVSLKGKVLPVGGIKEKTIAARRSGVNC 952
            |.|||||||||||.|:||:|:||||.||||:|:||||||:|.|::||:||:||||||||||.:..
plant   876 PAGATPKDGPSAGCTMITSLLSLATKKPVRKDLAMTGEVTLTGRILPIGGVKEKTIAARRSQIKT 940

  Fly   953 LILPVDNKKDFEELPTYITDGLEVHFATTYEDVYKIAF 990
            :|.|..|::||:||...:.:||.|||...|..::::||
plant   941 IIFPEANRRDFDELAENVKEGLNVHFVDDYGKIFELAF 978

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LonNP_730435.2 LON 93..>148 CDD:197740 20/81 (25%)
lon 95..990 CDD:273258 425/978 (43%)
P-loop_NTPase 530..>581 CDD:304359 35/50 (70%)
AAA 560..702 CDD:278434 108/141 (77%)
ChlI 778..991 CDD:304493 119/213 (56%)
LON1NP_568490.4 lon 146..978 CDD:273258 424/969 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 247 1.000 Domainoid score I538
eggNOG 1 0.900 - - E1_COG0466
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3521
Inparanoid 1 1.050 744 1.000 Inparanoid score I110
OMA 1 1.010 - - QHG55281
OrthoDB 1 1.010 - - D528132at2759
OrthoFinder 1 1.000 - - FOG0002884
OrthoInspector 1 1.000 - - otm3299
orthoMCL 1 0.900 - - OOG6_100411
Panther 1 1.100 - - O PTHR43718
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2242
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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