DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9372 and st14

DIOPT Version :10

Sequence 1:NP_649132.1 Gene:CG9372 / 40137 FlyBaseID:FBgn0036891 Length:408 Species:Drosophila melanogaster
Sequence 2:XP_685356.5 Gene:st14 / 557248 ZFINID:ZDB-GENE-140106-74 Length:841 Species:Danio rerio


Alignment Length:376 Identity:106/376 - (28%)
Similarity:165/376 - (43%) Gaps:74/376 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 NKDYGACSTPLGESGRCRHIIY------------------------------CRMPEL----KND 111
            |:|...||     :|.||...:                              |.|.:.    |||
Zfish   480 NEDQFTCS-----NGLCRPQFFVCDRANDCGDNSDEKDCDCGRAQVRCGNGACIMQDFVCDGKND 539

  Fly   112 VWRLVSQLCIIEKSSIGICCTDQSTSNRFS-----PQVVTSADGD---EPRIVNKPEQRGCGITS 168
                    |:.....:. |.......|.||     .|.|...:.:   |....:..:::||...:
Zfish   540 --------CLDGSDEVS-CAASPGVCNDFSFKCKNKQCVNKVNAECDREDDCSDGSDEQGCDCGT 595

  Fly   169 RQFP--RLTGGRPAEPDEWPWMAAL--LQEGLPFVWCGGVLITDRHVLTAAHCI------YKKNK 223
            |.:.  |:.||:.|:..||||..:|  ..:|..   ||..:|:::.:|.||||.      ||...
Zfish   596 RPYKHNRIVGGQNADVGEWPWQVSLHFKTQGHA---CGASIISNKWLLCAAHCFIQPDPSYKMTS 657

  Fly   224 EDI-FVRLGEYNTHMLNETRARDFRIANMVLHIDYNPQNYDNDIAIVRIDRATIFNTYIWPVCMP 287
            ..| :..|.:.|||. ...:.||.:  .::.|.:||....|.||:::.:.:...|:..:.|:|:|
Zfish   658 SWITYSGLRDQNTHD-KSVQMRDLK--TIITHPNYNDLTNDYDISLLELSQPLNFSNTVHPICLP 719

  Fly   288 PVNEDW-SDRNAIVTGWGTQKFGGPHSNILMEVNLPVWKQSDCRSSFVQHVPDTAMCAGFPEGGQ 351
            ..:..: :..:..||||||.:.||..:.||.:..:.|...:.|.......|....||:|:..||.
Zfish   720 ATSHVFTAGSSCFVTGWGTLREGGSAAQILQKAEVKVINDTVCNMVTEGQVTSRMMCSGYLSGGV 784

  Fly   352 DSCQGDSGGPLLVQLPNQRWVTIGIVSWGVGCGQRGRPGIYTRVDRYLDWI 402
            |:|||||||||:......:|...||||||.||.:|.:||:||||.:..:||
Zfish   785 DACQGDSGGPLVCLSEGGKWFQAGIVSWGEGCARRNKPGVYTRVTKLREWI 835

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9372NP_649132.1 CLIP 87..132 CDD:197829 12/78 (15%)
Tryp_SPc 173..402 CDD:214473 81/238 (34%)
st14XP_685356.5 SEA 78..175 CDD:460188
CUB 208..322 CDD:238001
CUB 331..437 CDD:238001
LDLa 445..477 CDD:238060
LDLa 479..513 CDD:238060 7/37 (19%)
LDLa 515..549 CDD:238060 6/42 (14%)
LDLa 556..591 CDD:238060 6/34 (18%)
Tryp_SPc 603..838 CDD:238113 82/239 (34%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.