DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lush and LOC1274914

DIOPT Version :10

Sequence 1:NP_524162.1 Gene:lush / 40136 FlyBaseID:FBgn0020277 Length:153 Species:Drosophila melanogaster
Sequence 2:XP_061500951.1 Gene:LOC1274914 / 1274914 VectorBaseID:AGAMI1_002677 Length:168 Species:Anopheles gambiae


Alignment Length:160 Identity:49/160 - (30%)
Similarity:82/160 - (51%) Gaps:14/160 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 WKRRS-SAVF----AIVLQVLVLL-----LPDPAVAMTMEQFLTSLDMIRSGCAPKFKLKTEDLD 58
            ||.|: ..:|    .:.:..|:||     ||......|:||.:.|.:||||.|..|.|:..|.::
Mosquito    13 WKARNVKRIFPLRKCLWIGGLLLLSTAPGLPPVEGKATVEQMMKSGEMIRSVCLGKTKVAEELVN 77

  Fly    59 RLRVGDFNFPPSQDLMCYTKCVSLMAGTVNKKGEFNAPKALAQLPHLVPPEMMEMSRKSVEACRD 123
            .||  :..|...::|.||..||..|..|: |||:.|...::.|:..::|.|:....|.:::.||.
Mosquito    78 GLR--ESKFADVKELKCYVNCVMEMMQTM-KKGKLNYDASVKQIDTIMPDELAGPMRAALDICRT 139

  Fly   124 THKQFKESCERVYQTAKCFSENADGQFMWP 153
            .....|.:|:..|...:|.|:| :.:|::|
Mosquito   140 VADGIKNNCDAAYVLLQCLSKN-NPKFIFP 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lushNP_524162.1 PhBP 42..145 CDD:214783 32/102 (31%)
LOC1274914XP_061500951.1 None

Return to query results.
Submit another query.