DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Taf6 and TAF6B

DIOPT Version :9

Sequence 1:NP_524161.2 Gene:Taf6 / 40134 FlyBaseID:FBgn0010417 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_001322136.1 Gene:TAF6B / 841877 AraportID:AT1G54360 Length:540 Species:Arabidopsis thaliana


Alignment Length:600 Identity:165/600 - (27%)
Similarity:266/600 - (44%) Gaps:120/600 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGKPSKPSSPSSSMLYGSSISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFM 65
            :|...||....:..|     ::.||::|||:|||:.:||.|.:..||.||..:::.::|:|.|.|
plant     1 LSRSKSKKKEGARRM-----VTKESIEVIAQSIGLSTLSPDVSAALAPDVEYRVREVMQEAIKCM 60

  Fly    66 NHAKRQKLSVRDIDMSLKVRN--------------VEPQYGFVAKDFIPFRFASGGGRELHFTED 116
            .||:|..|...|:|.:|..||              |:|.:.|.... :|......|.|||..||.
plant    61 RHARRTTLMAHDVDSALHFRNLEVSSSSLLLLFHTVDPDFDFFLYS-LPLAPKVCGSRELLRTEI 124

  Fly   117 KEIDLGEITSTNSV-----KIPLDLTLRSHWFVVEGVQPTVPENPPPLSKDSQLLDSVNPVIKMD 176
            ....:.:::|:..:     ::.|.:.|.|||..::|:||::|:|.|     .|.:..:......|
plant   125 YTSSMTKMSSSRMLSKLLYQMHLLMHLFSHWLAIDGIQPSIPQNSP-----LQAISDLKRSEYKD 184

  Fly   177 QGLNKDAAGKPTTGKIHKLKNVETIHVKQLATHELSVEQQLYYKEITE-ACVGSDEPRRGEALQS 240
            .||                          .|...||.:.|:|:.::|| |...|......:||.|
plant   185 DGL--------------------------AARQVLSKDLQIYFDKVTEWALTQSGSTLFRQALAS 223

  Fly   241 LGSDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSVMT 305
            |..|||||.::|...:||||.:..|:  :|..:|:.|||:.|:||.||.:.:|.|||:|:||::|
plant   224 LEIDPGLHPLVPFFTSFIAEEIVKNM--DNYPILLALMRLARSLLHNPHVHIEPYLHQLMPSIIT 286

  Fly   306 CIVSKQLCMRPELDNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRIFSKALQNDKTHLSSLYG 370
            |:::|:|..|.. ||||.||:|.:..:|..||.|..:.:||..||||.......:....|...||
plant   287 CLIAKRLGRRSS-DNHWDLRNFTASTVASTCKRFGHVYHNLLPRVTRSLLHTFLDPTKALPQHYG 350

  Fly   371 SIAGLSELGGEVIKVFIIPRLKFISERIEPHLL----GTSISNTDKTAAGH--------IRAMLQ 423
            :|.|:..||..:::..::|.|       .|:||    ...:....:.|..|        :.....
plant   351 AIQGMVALGLNMVRFLVLPNL-------GPYLLLLLPEMGLEKQKEEAKRHGAWLVYGALMVAAG 408

  Fly   424 KCCPPILRQMRS--APDTAEDYKNDFGFLGPSLCQAVVKVRNAPASSIVTLSSNTINTAPITSAA 486
            :|....|:...:  :|.|:..:|.:.....|       :.....||     |.|..:..|:...|
plant   409 RCLYERLKTSETLLSPPTSSVWKTNGKLTSP-------RQSKRKAS-----SDNLTHQPPLKKIA 461

  Fly   487 QTATTIGRVSMPTTQRQGSPGVSSLPQIRAIQANQPAQKFVIVTQNSPQQGQAKVVRRGSSPHSV 551
                ..|.:.|.:||.| ..|.:::||    |::..|.                 .|..:|| |.
plant   462 ----VGGIIQMSSTQMQ-MRGTTTVPQ----QSHTDAD-----------------ARHHNSP-ST 499

  Fly   552 VLSAASNAASASNSN 566
            :....|.||.....|
plant   500 IAPKTSAAAGTDVDN 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Taf6NP_524161.2 TAF6 22..383 CDD:173968 124/380 (33%)
TAF6BNP_001322136.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 139 1.000 Domainoid score I1550
eggNOG 1 0.900 - - E1_COG5095
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 265 1.000 Inparanoid score I946
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D384329at2759
OrthoFinder 1 1.000 - - FOG0003125
OrthoInspector 1 1.000 - - otm3373
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10221
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2507
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.930

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