DRSC/TRiP Functional Genomics Resources

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Protein Alignment Taf6 and TAFII59

DIOPT Version :10

Sequence 1:NP_524161.2 Gene:Taf6 / 40134 FlyBaseID:FBgn0010417 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_171987.1 Gene:TAFII59 / 839370 AraportID:AT1G04950 Length:549 Species:Arabidopsis thaliana


Alignment Length:580 Identity:192/580 - (33%)
Similarity:284/580 - (48%) Gaps:110/580 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SSISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSVRDIDMSLK 83
            |.:..|:::|||:|||:.:|..:||..||.||..:::.|:|:|.|.|.|:||..|:..|:|.:|.
plant     2 SIVPKETVEVIAQSIGITNLLPEAALMLAPDVEYRVREIMQEAIKCMRHSKRTTLTASDVDGALN 66

  Fly    84 VRNVEPQYGFVAKDFIPFRFASG-GGRELHFTEDKEIDLGEITSTNSVKIPLDLTLRSHWFVVEG 147
            :|||||.|||.:..  ||||... |.|:|.:|:|:|:|..::......|.|||..:..||..:||
plant    67 LRNVEPIYGFASGG--PFRFRKAIGHRDLFYTDDREVDFKDVIEAPLPKAPLDTEIVCHWLAIEG 129

  Fly   148 VQPTVPENPPPLSKDSQLLDSVNPVIKMDQGLNKDAAGKPTTGKIHKLKNVETIHVKQLATHELS 212
            |||.:|||.|        |:.:.               .|...|||:.|:...|.|:....|.||
plant   130 VQPAIPENAP--------LEVIR---------------APAETKIHEQKDGPLIDVRLPVKHVLS 171

  Fly   213 VEQQLYYKEITEACVG-SDEPRRGEALQSLGSDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIY 276
            .|.|||:::|.|..:. |:.|...|||.||.||.|||.::|....|||:.|...:  |:..||..
plant   172 RELQLYFQKIAELAMSKSNPPLYKEALVSLASDSGLHPLVPYFTNFIADEVSNGL--NDFRLLFN 234

  Fly   277 LMRMVRALLDNPSLFLEKYLHELIPSVMTCIVSKQLCMRPELDNHWALRDFASRLMAQICKNFNT 341
            ||.:||:||.||.:.:|.|||:|:|||:||:||::|..| ..||||.|||||:.|::.|||.:.|
plant   235 LMHIVRSLLQNPHIHIEPYLHQLMPSVVTCLVSRKLGNR-FADNHWELRDFAANLVSLICKRYGT 298

  Fly   342 LTNNLQTRVTRIFSKALQNDKTHLSSLYGSIAGLSELGGEVIKVFIIPRLKFISERIEPHLLGTS 406
            :...||:|:||....||.:.|..|:..||:|.||:.||..|:::.|:..|:.....:||.|....
plant   299 VYITLQSRLTRTLVNALLDPKKALTQHYGAIQGLAALGHTVVRLLILSNLEPYLSLLEPELNAEK 363

  Fly   407 ISNTDK------------TAAG---HIRAMLQKCCPPILRQMRSAPDTAEDYKNDFGFLGPSLCQ 456
            ..|..|            .|||   |.|.   |..||:                      ||   
plant   364 QKNQMKIYEAWRVYGALLRAAGLCIHGRL---KIFPPL----------------------PS--- 400

  Fly   457 AVVKVRNAPASSIVTL---SSNTINTAPITSAAQTATTIGRVSMPTTQRQGSPGVSSLPQIRAIQ 518
                    |:.|.:..   ....|:|.|...         ::|:.:::.|.       ||.|.|.
plant   401 --------PSPSFLHKGKGKGKIISTDPHKR---------KLSVDSSENQS-------PQKRLIT 441

  Fly   519 ANQPAQKFVIVTQNSPQQGQAKV-----VRRGSSPHSVVLSAASNAASASNSNSSSSGSL 573
            .:.|..     ..:..|.|.|.:     |...:.|.:.|..::|..||.:|.:.|.:|.:
plant   442 MDGPDG-----VHSQDQSGSAPMQVDNPVENDNPPQNSVQPSSSEQASDANESESRNGKV 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Taf6NP_524161.2 TAF6 22..393 CDD:227426 152/372 (41%)
TAF6C 209..425 CDD:381749 94/231 (41%)
HEAT repeat 213..244 CDD:381749 13/31 (42%)
HEAT repeat 251..286 CDD:381749 13/34 (38%)
HEAT repeat 296..339 CDD:381749 25/42 (60%)
HEAT repeat 346..378 CDD:381749 14/31 (45%)
HEAT repeat 380..424 CDD:381749 13/58 (22%)
TAFII59NP_171987.1 TAF6 1..383 CDD:227426 158/408 (39%)

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