DRSC/TRiP Functional Genomics Resources

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Protein Alignment Taf6 and Taf6l

DIOPT Version :10

Sequence 1:NP_524161.2 Gene:Taf6 / 40134 FlyBaseID:FBgn0010417 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_001101045.1 Gene:Taf6l / 309194 RGDID:1310123 Length:623 Species:Rattus norvegicus


Alignment Length:630 Identity:151/630 - (23%)
Similarity:253/630 - (40%) Gaps:155/630 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 ISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSVRDIDMSLKVR 85
            |..||::::|||.|: .|||:.|..|||||..:|:...|::::||.|.||:||:|.|.:.:|:..
  Rat    19 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNRALRWS 82

  Fly    86 NVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLGEIT-STNSVKIPLDLTLRSHWFVVEGVQ 149
            :||...|:.:::.:|.|.|..|  ||:|.||:|::|.|:. :||..|...:..:|.|...::|..
  Rat    83 SVEAVCGYGSQEVLPLRPAREG--ELYFPEDREVNLVELALATNIPKGCAETAVRVHVSYLDGKG 145

  Fly   150 PTVPENPPPLSKDSQLLDSVNPVIKMDQGLNKDAAGKPTTGKIHKLKNVETIHVKQLATHELSVE 214
            ...|:...| |..|.|.|.:                         ||                  
  Rat   146 NLAPQGSVP-SAVSSLTDDL-------------------------LK------------------ 166

  Fly   215 QQLYYKEITEACVGSDEPRRGEALQSLGSDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMR 279
               ||:::|.|.:|.|......|||.|.::..:..:||.. .::..|||  .|.::|..|..|::
  Rat   167 ---YYQQVTRAVLGDDPQLMKVALQDLQTNSKIAALLPYF-VYVVSGVK--SVSHDLEQLHRLLQ 225

  Fly   280 MVRALLDNPSLFLEKYLHELIPSVMTCIVSKQLCMRPELDNHWALRDFASRLMAQICKNFNTLTN 344
            :.|:|:.||.|.|..|:..|:.||:.|::.........|::||.|||.|:.|::.|......|.:
  Rat   226 VARSLIRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVS 290

  Fly   345 NLQTRVTRIFSKALQNDKTHLSSLYGSIAGLSELGGEVIKVFIIPRLKFISERIEPHLLGTSISN 409
            .|..::.....|.|.:....|.|.||::.||..||.:.::..:.|.|......::..|...|:||
  Rat   291 GLYQQILLSLQKVLTDPVRPLCSHYGAVVGLHALGWKAVERVLYPHLPTYWTNLQAVLDDYSVSN 355

  Fly   410 TDKTAAGH------------IRAMLQKCCPPIL-----RQMRSAPD------------------- 438
            ....|.||            :..|..:...|..     |..|.|.|                   
  Rat   356 AQVKADGHKVYGAILVAVERLLKMKAQAAEPNRGGLGGRGYRPAEDLPWDSLLLQESPPGGGSEP 420

  Fly   439 ----------------------TAEDYKNDFGFLGPSLC-------------------------- 455
                                  .|:.|:..:.|.|.||.                          
  Rat   421 GFGSGLLLPSGVAGSEDPSSLTLADIYRELYSFFGDSLATRFGTGQPAPTAPRPPGDKKEPATTP 485

  Fly   456 QAVVKVRNAPASSIVTLSSN------TINTAPITSAAQTATTIGRVSMPTTQRQGSPGVSS---L 511
            .:|.|:....||::|:...:      |:..|..||.::....:.|..  ...||..||..:   .
  Rat   486 DSVRKMPQLTASAVVSPQGDESPCGGTLAAANATSESRPLPRVHRAR--GAPRQQGPGAGTRDVF 548

  Fly   512 PQIRAIQANQPAQKFVIVTQNSPQQGQAKVVRR------GSSPHS 550
            .:.|......|..:|:|..:.:.::.:.::.:.      |.||.|
  Rat   549 QKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTAFPAPYGPSPAS 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Taf6NP_524161.2 TAF6 22..393 CDD:227426 109/371 (29%)
TAF6C 209..425 CDD:381749 61/227 (27%)
HEAT repeat 213..244 CDD:381749 10/30 (33%)
HEAT repeat 251..286 CDD:381749 11/34 (32%)
HEAT repeat 296..339 CDD:381749 13/42 (31%)
HEAT repeat 346..378 CDD:381749 9/31 (29%)
HEAT repeat 380..424 CDD:381749 10/55 (18%)
Taf6lNP_001101045.1 HEAT repeat 292..324 CDD:381749 9/31 (29%)
HEAT repeat 326..371 CDD:381749 9/44 (20%)
HFD_TAF6L 19..89 CDD:467056 30/70 (43%)
TAF6C 160..372 CDD:381749 64/260 (25%)
HEAT repeat 162..193 CDD:381749 13/76 (17%)
HEAT repeat 200..232 CDD:381749 11/34 (32%)
HEAT repeat 242..285 CDD:381749 13/42 (31%)

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