DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Taf6 and taf6

DIOPT Version :10

Sequence 1:NP_524161.2 Gene:Taf6 / 40134 FlyBaseID:FBgn0010417 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_587928.1 Gene:taf6 / 2539133 PomBaseID:SPCC16C4.18C Length:452 Species:Schizosaccharomyces pombe


Alignment Length:381 Identity:145/381 - (38%)
Similarity:219/381 - (57%) Gaps:29/381 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 ESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSVRDIDMSLKVRNVE 88
            ||:|.:||.:|:|:|:|:.|..:|.|:..::.::||:|.|||.|:||..|:..||..:|:..|||
pombe     9 ESIKDVAEMLGIGNLADEPAAAIAMDLEYRIHQVVQEATKFMVHSKRTVLTSADISSALRTLNVE 73

  Fly    89 PQYGFVAKDFIPFRF---ASGGGR-ELHFTEDKEIDLGEITSTNSVKIPLDLTLRSHWFVVEGVQ 149
            |.|||  .:..|..|   |.|.|: .|::.:|:|:|..:|.:....|:|.:::..:||..:||||
pombe    74 PLYGF--NNSRPLEFHEAAVGAGQNSLYYLDDEEVDFEKIINAPLPKVPRNISYSAHWLAIEGVQ 136

  Fly   150 PTVPENPPPLSKD-----SQLLDSVNPVIKMDQGLNKDAAGKPTTGKIHKLKNVETIHVKQLATH 209
            |.:|:||.|....     |:....|.|        ....|.|.....:..:.|||   :|.|..|
pombe   137 PAIPQNPTPSDHTVGEWASKGTSGVMP--------GASTAAKEARNGVTSMDNVE---IKPLVRH 190

  Fly   210 ELSVEQQLYYKEITEACVGSDEPR---RGEALQSLGSDPGLHEMLPRMCTFIAEGVKVNVVQNNL 271
            .||.|.|||::.||.|.:  ||..   |..||.||..|||||::||....|:::.|..|:  .||
pombe   191 VLSKELQLYFERITSALL--DETNVELRDAALSSLRDDPGLHQLLPYFIMFLSDSVTRNL--GNL 251

  Fly   272 ALLIYLMRMVRALLDNPSLFLEKYLHELIPSVMTCIVSKQLCMRPELDNHWALRDFASRLMAQIC 336
            .:|..||.|..||||||:||:|.|:.:|:||::||:|:|:|...|....|:||||.|:.|:..:|
pombe   252 VVLTTLMHMAWALLDNPNLFVEPYVQQLMPSILTCLVAKRLGSDPNNHEHYALRDLAAFLLGIVC 316

  Fly   337 KNFNTLTNNLQTRVTRIFSKALQNDKTHLSSLYGSIAGLSELGGEVIKVFIIPRLK 392
            ..|..:...|:.||||...||..::....|:.||:|.||..:|.|.|:|.::|.:|
pombe   317 DRFGNVYYTLKPRVTRTALKAFLDNTKPYSTHYGAIKGLKTMGKEAIRVLVVPNIK 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Taf6NP_524161.2 TAF6 22..393 CDD:227426 145/381 (38%)
TAF6C 209..425 CDD:381749 80/187 (43%)
HEAT repeat 213..244 CDD:381749 14/33 (42%)
HEAT repeat 251..286 CDD:381749 13/34 (38%)
HEAT repeat 296..339 CDD:381749 17/42 (40%)
HEAT repeat 346..378 CDD:381749 13/31 (42%)
HEAT repeat 380..424 CDD:381749 5/13 (38%)
taf6NP_587928.1 TAF6 1..452 CDD:227426 145/381 (38%)

Return to query results.
Submit another query.