DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Taf6 and Taf6l

DIOPT Version :9

Sequence 1:NP_524161.2 Gene:Taf6 / 40134 FlyBaseID:FBgn0010417 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_666204.2 Gene:Taf6l / 225895 MGIID:2444957 Length:623 Species:Mus musculus


Alignment Length:630 Identity:150/630 - (23%)
Similarity:252/630 - (40%) Gaps:155/630 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 ISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSVRDIDMSLKVR 85
            |..||::::|||.|: .|||:.|..|||||..:|:...|::::||.|.||:||:|.|.:.:|:..
Mouse    19 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNRALRWS 82

  Fly    86 NVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLGEIT-STNSVKIPLDLTLRSHWFVVEGVQ 149
            :||...|:.:::.:|.|.|..|  :|:|.||:|:.|.|:. :||..|...:..:|.|...::|..
Mouse    83 SVEAVCGYGSQEALPLRPAREG--DLYFPEDREVSLVELALATNIPKGCAETAVRVHVSYLDGKG 145

  Fly   150 PTVPENPPPLSKDSQLLDSVNPVIKMDQGLNKDAAGKPTTGKIHKLKNVETIHVKQLATHELSVE 214
            ...|:...| |..|.|.|.:                         ||                  
Mouse   146 NLAPQGSVP-SAVSSLTDDL-------------------------LK------------------ 166

  Fly   215 QQLYYKEITEACVGSDEPRRGEALQSLGSDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMR 279
               ||:::|.|.:|.|......|||.|.::..:..:||.. .::..|||  .|.::|..|..|::
Mouse   167 ---YYQQVTRAVLGDDPQLMKVALQDLQTNSKIAALLPYF-VYVVSGVK--SVSHDLEQLHRLLQ 225

  Fly   280 MVRALLDNPSLFLEKYLHELIPSVMTCIVSKQLCMRPELDNHWALRDFASRLMAQICKNFNTLTN 344
            :.|:|:.||.|.|..|:..|:.||:.|::.........|::||.|||.|:.|::.|......|.:
Mouse   226 VARSLIRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVS 290

  Fly   345 NLQTRVTRIFSKALQNDKTHLSSLYGSIAGLSELGGEVIKVFIIPRLKFISERIEPHLLGTSISN 409
            .|..::.....|.|.:....|.|.||::.||..||.:.::..:.|.|......::..|...|:||
Mouse   291 GLYQQILLSLQKVLTDPVRPLCSHYGAVVGLHALGWKAVERVLYPHLPTYWTNLQAVLDDYSVSN 355

  Fly   410 TDKTAAGH------------IRAMLQKCCPPIL-----RQMRSAPD------------------- 438
            ....|.||            :..|..:...|..     |..|.|.|                   
Mouse   356 AQVKADGHKVYGAILVAVERLLKMKAQAAEPNRGGLGGRGYRPAEDLPWDSLLLQESPPGGSSET 420

  Fly   439 ----------------------TAEDYKNDFGFLGPSLC-------------------------- 455
                                  .|:.|:..:.|.|.||.                          
Mouse   421 GFGSGLPPPSGVAGPEDPSSLTLADIYRELYSFFGDSLATRFGTGQPAPTAPRPPGDKKEPAAAP 485

  Fly   456 QAVVKVRNAPASSIVTLSSN------TINTAPITSAAQTATTIGRVSMPTTQRQGSPGVSS---L 511
            .:|.|:....||::|:...:      |:.||...|.::....:.|..  ...||..||..:   .
Mouse   486 DSVRKMPQLTASAVVSPQGDESPCGGTLATATAASESRPLPRVHRAR--GAPRQQGPGAGTRDVF 548

  Fly   512 PQIRAIQANQPAQKFVIVTQNSPQQGQAKVVRR------GSSPHS 550
            .:.|......|..:|:|..:.:.::.:.::.:.      |.||.|
Mouse   549 QKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTAFPAPYGPSPAS 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Taf6NP_524161.2 TAF6 22..383 CDD:173968 106/361 (29%)
Taf6lNP_666204.2 TAF6 20..329 CDD:173968 106/361 (29%)
Globin_like 323..>381 CDD:304364 12/57 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5095
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D384329at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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