DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Taf6 and eri-3

DIOPT Version :9

Sequence 1:NP_524161.2 Gene:Taf6 / 40134 FlyBaseID:FBgn0010417 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_493918.2 Gene:eri-3 / 173497 WormBaseID:WBGene00021103 Length:578 Species:Caenorhabditis elegans


Alignment Length:281 Identity:60/281 - (21%)
Similarity:96/281 - (34%) Gaps:73/281 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   342 LTNNLQTRVTRIFSKALQN--------DKTHLSSLYGSIAGLSELGGEVI--KVFIIPRLKFISE 396
            |.|:...||....|::..|        :..:.||..|.|...|...||||  :.|....:.||..
 Worm     5 LVNSRPLRVKSHESESKLNLIEQEDQFEGANYSSSSGVIICYSNGTGEVITQEAFDDSGIHFIFS 69

  Fly   397 RIEPHLLGTSI---SNTDKTAAG------------------HIRAMLQ-----KCCPPILRQMRS 435
            :      .|.|   ||.|....|                  ||...::     |||..:..|:..
 Worm    70 K------ATCIQYPSNFDPIGVGSVVQIFWSRSFERVVRGNHIIVQIEKMEVYKCCAMLREQVFV 128

  Fly   436 APDTAEDYKNDFGFLGPSLCQAVVKV--RNAPASSIVTLSSNTINTAP-ITSAAQTATTIGRVSM 497
            .            |..||.....:.|  ||      :|::.:. |.:| |......|.:|||...
 Worm   129 T------------FNSPSTAGVAIGVTERN------ITVAFHP-NCSPVIRYETLKAHSIGRTEF 174

  Fly   498 -------PTTQRQGSPGVSSLPQIRAIQANQPAQKFVIV--TQNSPQQGQAKVVRRGSSPHSVVL 553
                   ..|.|.....::::|....|..|.....|.::  .:|||.:..|.|:.:....|.:..
 Worm   175 EIKDRHRENTNRMVDVILAAVPFRVEIHGNVDKIPFFVIEKCRNSPGRSGAAVITKIMKNHFMEA 239

  Fly   554 SAASNAASASNSNSSSSGSLL 574
            :...|:.|....::|...::|
 Worm   240 NFLQNSESIYFDSTSCHSNIL 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Taf6NP_524161.2 TAF6 22..383 CDD:173968 13/48 (27%)
eri-3NP_493918.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5095
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.