DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ash1 and SET4

DIOPT Version :9

Sequence 1:NP_001246834.1 Gene:ash1 / 40133 FlyBaseID:FBgn0005386 Length:2226 Species:Drosophila melanogaster
Sequence 2:NP_012430.1 Gene:SET4 / 853339 SGDID:S000003641 Length:560 Species:Saccharomyces cerevisiae


Alignment Length:496 Identity:98/496 - (19%)
Similarity:185/496 - (37%) Gaps:131/496 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1656 LCSPRNIKTRGLTQAVHDPELEKMAKMAVVLRDICSAMETLKMSDLLTTVSSKKK-----KPIKT 1715
            :.||.::.:|.:.|.                |...:..:.:..|...::.||..|     .|:  
Yeast     1 MTSPESLSSRHIRQG----------------RTYTTTDKVISRSSSYSSNSSMSKDYGDHTPL-- 47

  Fly  1716 TLSGKLGSTAATSK-VEFRSIQAQVEQGHYKTPQEFDDHMQQLFVEAKQQHGDDEGKEKALQSLK 1779
            ::|.....|..:.: :..|:.......|  .||.....:.:.:|     .|....|..|..    
Yeast    48 SVSSAASETLPSPQYMPIRTFNTMPTAG--PTPLHLFQNDRGIF-----NHHSSSGSSKTA---- 101

  Fly  1780 DSYEQQKIASYVQLVEILGDSESLQSFKPKEVLSSEEEPGKIAVKKSPGAKERDSPIVPLKVTPP 1844
             |..::.||:.|.|.     :.:...|..|:  .::::..|::|..:..:||.       |:|| 
Yeast   102 -STNKRGIAAAVALA-----TAATIPFPLKK--QNQDDNSKVSVTHNESSKEN-------KITP- 150

  Fly  1845 PLLPIEASPDEDVIRCICGL--YKDEGLMIQCSKCMVWQHTEC---TKADIDADNYQCERCE--- 1901
               .:.|..::....||||.  .||| |.|||:||..|||..|   .|:|....::.|:||:   
Yeast   151 ---SMRAEDNKPKNGCICGSSDSKDE-LFIQCNKCKTWQHKLCYAFKKSDPIKRDFVCKRCDSDT 211

  Fly  1902 ------------PREVDREIPLEEFTEEGHRYYLSLMRGDLQVRQGDAVYVLRDIPIKDESGKVL 1954
                        ||::..| .|.:|:.     .::....:....| .:|..:.:.|.|.:.....
Yeast   212 KVQVNQVKPMIFPRKMGDE-RLFQFSS-----IVTTSASNTNQHQ-QSVNNIEEQPKKRQLHYTA 269

  Fly  1955 PTKKHTYETIGAIDYQECDIFRVEHLWKNELGKRFIFGHHFLRP--HETFHEPSRRFYPNEVVRV 2017
            ||.:::                 ..:.|....::.:...|||:|  :|........|   :.:.:
Yeast   270 PTTENS-----------------NSIRKKLRQEKLVVSSHFLKPLLNEVSSSNDTEF---KAITI 314

  Fly  2018 SLYEVVPIELVIGR----CWVLDRTTFCKGRPMECNDEDHCYICELRVDKTA--RFFSKAKANHP 2076
            |.|:...:::.|..    .||:            |::.:.....::.|.|::  |.|....|:  
Yeast   315 SEYKDKYVKMFIDNHYDDDWVV------------CSNWESSRSADIEVRKSSNERDFGVFAAD-- 365

  Fly  2077 ACTKSYAFRKFPEKIKISKSYAPHDVDPS----LLKTRKQK 2113
            :|.|....:::..||...|:|   ..||:    |:.|.|.|
Yeast   366 SCVKGELIQEYLGKIDFQKNY---QTDPNNDYRLMGTTKPK 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ash1NP_001246834.1 AWS 1340..1388 CDD:197795
SET 1392..1512 CDD:214614
Bromo_ASH1 1680..1787 CDD:99955 17/112 (15%)
PHD_ASH1L 1858..1900 CDD:277023 20/46 (43%)
BAH_polybromo 1929..2073 CDD:240068 23/151 (15%)
SET4NP_012430.1 SET 16..526 CDD:225491 94/465 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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