DRSC/TRiP Functional Genomics Resources

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Protein Alignment ash1 and setdb1b

DIOPT Version :9

Sequence 1:NP_001246834.1 Gene:ash1 / 40133 FlyBaseID:FBgn0005386 Length:2226 Species:Drosophila melanogaster
Sequence 2:XP_005158070.2 Gene:setdb1b / 768131 ZFINID:ZDB-GENE-061013-224 Length:1242 Species:Danio rerio


Alignment Length:1257 Identity:246/1257 - (19%)
Similarity:409/1257 - (32%) Gaps:438/1257 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   730 RRHKKSQSNDSSSPDDHKLPLKKRHYLLTPGERPPAEVAFANGKLNAEAWAAAAAAAKSTASTKS 794
            |:..:.|.:.|.:....|..|::....:...|:..|::.           |..:.|::|..    
Zfish    59 RKWIEEQVDSSEAVQKRKADLEQLQEWVEQREKEVADID-----------ALCSNASESVV---- 108

  Fly   795 QAQFNARSVKSALTPKKRHLLEQPTSVSGAGSSASNSPLRIVVDNNS----ISGGKLLDISP-SS 854
            |.:...:.|.|.:     .|:.:.:|....|..|:.|.: |.:|::.    |:.|.|  :.| .|
Zfish   109 QCEALVKEVYSNM-----GLVYRESSSDDEGGKANPSEV-IEIDDDDDDDVIAVGCL--VPPKKS 165

  Fly   855 LCSLKQQ--RRGGAAKQKVS-AAKDLVQ---------LQSPAGSYPPPGVFEPSVELEIQIPLSK 907
            |...|..  :...||.|:.| ..::|.|         :.:|..:..|||          |.||: 
Zfish   166 LTQAKDPALKEASAALQRTSQQVQNLAQTVNRTAQSGVTTPVKTGGPPG----------QGPLA- 219

  Fly   908 LNESVITKAEVESPLLSALDIKEDTKK----EVGQRVVET-------LLHKTGGNLLLK----RK 957
            :....::.|...:|.....:||:|:.|    .:|::..:|       .:.:.|.||..|    .|
Zfish   220 VPAVFMSSAPRNTPTQPNPNIKQDSIKINMTLLGKKRTKTWHRGTLVAIKQVGNNLKYKVRFENK 284

  Fly   958 RKKI---NRTGF---PTVRRKKRKVSVEQQTTA-------------VIDEHE------------- 990
            .|.:   |...|   ||:.|    :.|..:..|             |:.|..             
Zfish   285 GKSLLSGNHVAFEYHPTLER----LFVGARVVARYKDGNQVWLYAGVVAEMPNSKNRMRFLIFFD 345

  Fly   991 ---------PEFDPDDEPLQSLRE------TRSSNNVNVQAAPNPPLDC---------------- 1024
                     ||..|...||:...|      .|......:.:.||.|:..                
Zfish   346 DGYASYVGLPELYPICRPLKKTWEDIEDASCRDFIEEYITSYPNRPMVLLKPGQIIKTEWEGTWW 410

  Fly  1025 -ERVPQA----------GEARETFVARTNQKAPRLSVVALERL---------QRPQTPARGRPRG 1069
             .||.:.          .:.|..::.|.:.:...:..:.:...         |:.|.|..|..|.
Zfish   411 KSRVEEVDGSLVKMLFLDDKRSEWIYRGSTRLEPMFNLKMNTANSQEKKMAGQQRQRPNMGALRT 475

  Fly  1070 RKP------KNREQAE-----AAPQPPPKSEPEIRPAKKRGRQPKQPVLEEPPPTPPPQQKKN-- 1121
            :.|      .|...|.     |.|..|      .||...:...|.||...|.|.......||:  
Zfish   476 KGPVVQYTSDNSAAASTGGGAATPGTP------TRPVAPQPAGPPQPSRTESPSFKSQMAKKSTG 534

  Fly  1122 --KMEPNIRLPDGIDP-------NTNFSCKIRLKRRKNLEAGTQPKKEKPVQPVTVEEIPPEIPV 1177
              .::|...:|..:.|       .||.|      |...|::|       ||..:|     |..|.
Zfish   535 QLALQPRQGMPSDLQPKPIINALQTNTS------RLFLLQSG-------PVHTLT-----PITPA 581

  Fly  1178 SQEEIDAEAEAKRLDSIPTEHDPLPASE---------SHNPGPQDYASCSESSEDKASTTSLRKL 1233
            .| .:.........:.:|.|    |:.:         :||..|:    |               |
Zfish   582 PQ-TVQTAISTYTNERVPQE----PSYQAPNDRLFYLTHNCSPE----C---------------L 622

  Fly  1234 SKVKKTY---------LVAGLFSNHYKQSLMPPPAKVNKKPGLEE-QVGPASL-LPPPPYCEKYL 1287
            .:::.|.         |:..|.   |:...|....::|:|..... ...|..| |......::||
Zfish   623 KRIRPTRPNLHRGRNPLLTPLL---YEFRRMTGRRRLNRKMSFHVIYKSPCGLSLRNMTEIQRYL 684

  Fly  1288 RRTEMDF---EL----PY-----------------DIWWAYTNSKLPTRNVV-----PSWNYRKI 1323
            .:|:.||   |:    ||                 ||.....:..|...|.:     ||..|.|.
Zfish   685 FQTQCDFIFLEMFCLDPYVLVDRRFQPQRPFYFIRDITSGREDIPLSCVNEIDNTPPPSVAYSKE 749

  Fly  1324 R---TNVYAESVRPNLAGFDHPTCNCKNQGEKSC--------------------------LDNCL 1359
            |   ..||..:....|.|.| .|..|:::.:.||                          ||.||
Zfish   750 RIPEDGVYINTSADFLVGCD-CTDGCRDKSKCSCHQLTLQATGCTPGGQINPNAGYHYKRLDECL 813

  Fly  1360 NRMVYTECSPSNCPAG-EKCRNQKIQRHAVAPGVERFMTADKGWGVRTKLPIAKGTYILEYVGEV 1423
            ...:| ||: ..|... :.|.|:.:| |.:...::.|.|.:||||:|....||||:::..|.|::
Zfish   814 PTGIY-ECN-KRCRCNMQMCTNRLVQ-HGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKI 875

  Fly  1424 VTEKEFKQRMASIYLNDTHHYCLHLDGGLVIDGQRMGSDCRFVNHSCEPNCEMQKWSVNGLSRMV 1488
            :|: :|..:                      :|..|| |..|.|                     
Zfish   876 LTD-DFADK----------------------EGLEMG-DEYFAN--------------------- 895

  Fly  1489 LFAKRAIEEGEELTYDYNFSLFNPSEG--QPCRCNTPQCRGVIGGKSQRVKPLPAVEAKPSGEGL 1551
                          .|:..|:.|..||  ....|:..:..||   ...||| |||          
Zfish   896 --------------LDHIESVENFKEGYESEAHCSDSEGSGV---DMSRVK-LPA---------- 932

  Fly  1552 SGRNGRQRKQKAKKHAQRQAGKDISSAVAVAKLQPLSEKEK--------------KLVRQ--FNT 1600
            |.|:|:..|.:.:..:.....:|.||..        |:.||              ..|:.  :.|
Zfish   933 SSRHGKSNKMEERNSSTTGKSQDDSSEE--------SDDEKDDDSNEDDSDSSDDTFVKDTYYTT 989

  Fly  1601 FLV-RNFEKIRRCKA-KRASDAAATASSPALGTTNGDIPGRRPSTPSSPSLAAQI---SALCSPR 1660
            ..| |::...|:.|. |..|..:....|.:.|....  |...|.......:|:.:   |:..:.:
Zfish   990 SSVWRSYTTRRQAKGLKEESQDSKDGMSVSAGEDRK--PPHMPEETGKSKVASWLTNQSSTSANQ 1052

  Fly  1661 NIKTRGLTQAVHDPELEKMAKMAVVLRDICSAMETLKMSDLLTTVSS----KKKKPIKT-TLSGK 1720
            ::|..|      ..:.||        :|:.    ||..||.:.|:||    .|::..|| .:..:
Zfish  1053 SVKVEG------GIKTEK--------KDVM----TLSDSDDVQTISSGSDDNKEREKKTQAVVKR 1099

  Fly  1721 LGSTAATSKVEFRSIQAQVEQG 1742
            ..:..:|..:..:|....|:.|
Zfish  1100 QVAVKSTRGIALKSHSMMVKSG 1121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ash1NP_001246834.1 AWS 1340..1388 CDD:197795 17/74 (23%)
SET 1392..1512 CDD:214614 23/119 (19%)
Bromo_ASH1 1680..1787 CDD:99955 15/68 (22%)
PHD_ASH1L 1858..1900 CDD:277023
BAH_polybromo 1929..2073 CDD:240068
setdb1bXP_005158070.2 TUDOR 305..364 CDD:295375 7/58 (12%)
TUDOR 395..446 CDD:197660 4/50 (8%)
HMT_MBD 638..699 CDD:238689 15/63 (24%)
Pre-SET 721..834 CDD:282838 26/115 (23%)
SET 842..>905 CDD:214614 23/121 (19%)
SET <1142..1219 CDD:214614
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593883
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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