DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ash1 and suv39h1a

DIOPT Version :10

Sequence 1:NP_524160.2 Gene:ash1 / 40133 FlyBaseID:FBgn0005386 Length:2226 Species:Drosophila melanogaster
Sequence 2:NP_001003592.1 Gene:suv39h1a / 445198 ZFINID:ZDB-GENE-040801-111 Length:411 Species:Danio rerio


Alignment Length:263 Identity:77/263 - (29%)
Similarity:113/263 - (42%) Gaps:62/263 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  1316 PSWNYRKIRTNVYAESVRPNLAGFDHPTCNCKNQGEKSCLDNCLN-RMVYT-------------- 1365
            |..|:..|..|...:.|..|.........:|.:|....|....|. |..|.              
Zfish   155 PPKNFTYINENKLGKGVDMNAVIVGCECADCVSQPVDGCCPGLLKFRRAYNESRRVKVMPGVPIY 219

  Fly  1366 ECSPSNCPAGEKCRNQKIQRHAVAPGVER----FMTAD-KGWGVRTKLPIAKGTYILEYVGEVVT 1425
            ||: |.|..|..|.|:.:||     |::.    |.|.: :||||||...|.|.::::||:||::|
Zfish   220 ECN-SKCRCGPDCANRVVQR-----GIQYDLCIFKTDNGRGWGVRTLQRINKNSFVMEYLGEIIT 278

  Fly  1426 EKEFKQR------MASIYLNDTHHYCLHLDGGLVIDGQRMGSDCRFVNHSCEPNCEMQKWSVNGL 1484
            ..|.::|      ....||.|..    ::|....||....|:...||||||:||.::....::.|
Zfish   279 TDEAERRGVLYDKQGVTYLFDLD----YVDDVYTIDAAHYGNISHFVNHSCDPNLQVYNVFIDNL 339

  Fly  1485 S----RMVLFAKRAIEEGEELTYDYNFSL-------------FNPS--EGQP-------CRCNTP 1523
            .    |:.|||||.|:.|||||:||..::             |:.:  ||.|       |:|...
Zfish   340 DERLPRIALFAKRGIKAGEELTFDYKMTVDPVDAESTKMDLDFSRAGIEGSPIKRVHMECKCGVR 404

  Fly  1524 QCR 1526
            .||
Zfish   405 NCR 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ash1NP_524160.2 PHA03247 <1018..1281 CDD:223021
AWS 1340..1388 CDD:197795 15/62 (24%)
SET_ASH1L 1391..1531 CDD:380951 56/173 (32%)
Bromo_ASH1 1680..1787 CDD:99955
PHD_ASH1L 1858..1900 CDD:277023
BAH_polybromo 1929..2073 CDD:240068
suv39h1aNP_001003592.1 CD_SUV39H1_like 43..91 CDD:349289
SET 157..411 CDD:394802 76/261 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.