DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ash1 and trx

DIOPT Version :9

Sequence 1:NP_001246834.1 Gene:ash1 / 40133 FlyBaseID:FBgn0005386 Length:2226 Species:Drosophila melanogaster
Sequence 2:NP_476769.1 Gene:trx / 41737 FlyBaseID:FBgn0003862 Length:3726 Species:Drosophila melanogaster


Alignment Length:1831 Identity:333/1831 - (18%)
Similarity:596/1831 - (32%) Gaps:630/1831 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TAAAKVLETQRAQESGSENE--ETDSITDQSSQSKSIK-----SATQFSVQ-RSDT--------D 56
            :||.:..|....:|..::..  :.|.:.|..::.:.|.     |..|||.| :.|.        |
  Fly  2210 SAAKRYFEKSEGREEAAKMRIMQMDGVDDSITEFRIISGDGNLSTAQFSGQVKCDRCQCTYRNYD 2274

  Fly    57 GLRMRISAIRPTLGVVATKKPPKSRKMSTQDTESGCS------EAKNRAVSKKVKVKRKKLASSS 115
            ..:..:.:..||              ||:.:|||..|      .|...:.....:::::.||::.
  Fly  2275 AFQRHLPSCSPT--------------MSSNETESDVSGQGMTNNATQISAESLNELQKQLLANAG 2325

  Fly   116 GISKSDKVSKSKK-------------------------------SQISAFSSDSEDDLPLKVHQQ 149
            |::.....:...:                               ||.:..:..:.|||.:..:..
  Fly  2326 GLNYLQSATSFPQVQSLGSLGQFGLQGLQQLQLQPQSLGSGFFLSQPNPATQANTDDLQIYANSL 2390

  Fly   150 RAPRVLLSAIIQAAQSASKPTLD-------IGISSSDN------ELPNLVQAAIKRVESDTEDTT 201
            ::    |:|.:....:.::||:.       |.:|::.:      ::|..:||.          ||
  Fly  2391 QS----LAANLGGGFTLAQPTVTAPAQPQLIAVSTNPDGTQQFIQIPQTMQAT----------TT 2441

  Fly   202 VEGSFRKAAKDKNLPQYQSTLLQDFMEKTQMLGQTVNAKLAEEKVAKAKEETLVQTAVPRKRRGR 266
            ...:::             ||.....:|..||..|...|..:....||.:    |.||.:::...
  Fly  2442 PTATYQ-------------TLQATNTDKKIMLPLTAAGKPLKTVATKAAQ----QAAVKQRQLKS 2489

  Fly   267 PKKVVPTVPAPGNSGPAINESADSGVIST----------------TSTTQSTTPS---PKMQNEN 312
            ..:|.| :.|.....|..::......:..                .|:||:..|.   |:.|.:|
  Fly  2490 GHQVKP-IQAKLQPHPQQHQQQQQTQVQQPITVMGQNLLQPQLLFQSSTQTQAPQIILPQAQPQN 2553

  Fly   313 AVP--TG-----------SLPIASSSKPKIDMAYLDKRMYATERVLYPPPRS------KRRQNNK 358
            .:.  ||           |:|.|...||:       .:..||...|...|.:      .....|.
  Fly  2554 IISFVTGDGSQGQPLQYISIPTAGEYKPQ-------PQPTATPTFLTTAPGAGATYLQTDASGNL 2611

  Fly   359 KTACSSSNK-------EELQLDP-------------LWREIDVNKKFRLRSMSV-----GAASGT 398
            ....:.||.       :.||..|             |....|.|:....:...:     |.:||.
  Fly  2612 VLTTTPSNSGLQMLTAQSLQAQPQVIGTLIQPQTIQLGGGADGNQPGSNQQPLILGGTGGGSSGL 2676

  Fly   399 GASTTICSKVLAAKSGYVSDYGSVRHQRSSHNHNSGYKSDA-----SCKSRYS-TKSCMSRRSRA 457
            ..:||....:||.:..|   ||.....:::...:..:.|.|     |..:.:| |.:.:.:.|:.
  Fly  2677 EFATTSPQVILATQPMY---YGLETIVQNTVMSSQQFVSTAMPGMLSQNASFSATTTQVFQASKI 2738

  Fly   458 K-----SCGY--RSDCKESGKSGLRMRRKRRASMLLKSSADDTVEDQDILQLAGLSLGQSSEESN 515
            :     ..||  .::..::..:|..:   ..||:|.:.:.|||.  ..|||.|..          
  Fly  2739 EPIVDLPAGYVVLNNTGDASSAGTFL---NAASVLQQQTQDDTT--TQILQNANF---------- 2788

  Fly   516 EYISKPSLKSLPTTSASKKYGEINRYVTTGQYFGRGGSLSATNPDNFISKM--MNQRKETPAPSK 578
                  ..:|:||:|                  |...|:..|:|....:|:  :.|.|.|.|.:|
  Fly  2789 ------QFQSVPTSS------------------GASTSMDYTSPVMVTAKIPPVTQIKRTNAQAK 2829

  Fly   579 SSCKIKSRRSSAASMCSSYVSGVSRMRRRHRRKSFSHNKSLNIDSKLLTEIEIITSTFNSRCRIQ 643
                            ::.:|||.::..:.:           :.:|:| ...|:|.  .|:.:::
  Fly  2830 ----------------AAGISGVGKVPPQPQ-----------VVNKVL-PTSIVTQ--QSQVQVK 2864

  Fly   644 DDRLTGSSGKEKLLADANKLQATLAAPSPAQQLTLNGGGPASTLSKPLKRGLKKRKLSEPLVDFA 708
            :..|..|..|.|                .|.......|.|.|..||||:   ||..:..|:....
  Fly  2865 NSNLKQSQVKGK----------------AASGTGTTCGAPPSIASKPLQ---KKTNMIRPIHKLE 2910

  Fly   709 MLSASASGTPNGSGSSNGNTKRRHKKSQSNDSSSP------------DDHKLP-------LKKRH 754
            :.......||.....::...:::.::........|            ...::|       |::..
  Fly  2911 VKPKVMKPTPKVQNQNHSLLQQQQQQQPQLQQQIPAVVVNQVPKVTISQQRIPAQTQQQQLQQAQ 2975

  Fly   755 YLLTPGERPPAEVAFANGKLNAEAWAAAAAAAKSTASTKSQAQFNARSVKSALTPKKRHLLEQPT 819
            .:..|.::.|.:......:.:......|.|..       .|:||       .:.|:.....|...
  Fly  2976 MIHIPQQQQPLQQQQVQVQPSMPIITLAEAPV-------VQSQF-------VMEPQALEQQELAN 3026

  Fly   820 SVSGAGSSASNSPLRIVVDNNSISGGKLLDISPSSLCS---------LKQQRRGGAAKQKVSAAK 875
            .|....:|:|:|.....:..|.::  .:...:||:..|         |..|:|    ::....:.
  Fly  3027 RVQHFSTSSSSSSSNCSLPTNVVN--PMQQQAPSTTSSSTTRPTNRVLPMQQR----QEPAPLSN 3085

  Fly   876 DLVQLQSPAGSYPPPGVFEPSVELEIQIPLSKLNESVITKAEVESPLLSA------------LDI 928
            :...:.||.   ||..|.:|.:.   |:..:.:::....|:.:.||:..|            .|:
  Fly  3086 ECPVVSSPT---PPKPVEQPIIH---QMTSASVSKCYAQKSTLPSPVYEAELKVSSVLESIVPDV 3144

  Fly   929 KEDTKKEVGQRVVETLL------------HKTGGNLLLKRKRKKINR----TGFPTVRRKKRKVS 977
            ..|...| .|.|.|::.            .||...||.:::|:::|:    .|:   ...|....
  Fly  3145 TMDAILE-EQPVTESIYTEGLYEKNSPGESKTEQLLLQQQQREQLNQQLVNNGY---LLDKHTFQ 3205

  Fly   978 VEQQTTAVIDEHEPEFDPDDEPLQSLRETRSSNN------------------------------- 1011
            ||...|.|..|.:.|.:.|::...||:...|:.|                               
  Fly  3206 VEPMDTDVYREEDLEEEEDEDDDFSLKMATSACNDHEMSDSEEPAVKDKISKILDNLTNDDCADS 3270

  Fly  1012 -------------------------VNVQAAPNPPLDCERVPQAGEARETFVARTNQKAPRLSVV 1051
                                     ...|:||....:......|.||..|::   |:.|. ..|:
  Fly  3271 IATATTMEVDASAGYQQMVEDVLATTAAQSAPTEEFEGALETAAVEAAATYI---NEMAD-AHVL 3331

  Fly  1052 ALERLQR-PQTPARGRPRGRKPKNREQAE---------AAPQPPPKSEPEIRPAKKRGRQPKQPV 1106
            .|::||. .:...|.|...::..::||.:         |||:||                  ||:
  Fly  3332 DLKQLQNGVELELRRRKEEQRTVSQEQEQSKAAIVPTAAAPEPP------------------QPI 3378

  Fly  1107 LEEPPPTPPPQQKKNKMEPNIRLPDGIDPNTNFSCKI--------RLKRRKNLEAGTQPKKEKPV 1163
            .|....|.|      .:...|:..||....::...:|        ::.||.:   |..|..|.|:
  Fly  3379 QEPKKMTGP------HLLYEIQSEDGFTYKSSSITEIWEKVFEAVQVARRAH---GLTPLPEGPL 3434

  Fly  1164 QPV---------------TVEEIP---------PEIPVSQEEIDAEAEAKRLDSI--PTEHDPLP 1202
            ..:               .:|::|         |:.......:...|......::  .:....|.
  Fly  3435 ADMGGIQMIGLKTNALKYLIEQLPGVEKCSKYTPKYHKRNGNVSTAANGAHGGNLGGSSASAALS 3499

  Fly  1203 ASESHNPGPQDYASCSESSEDKASTTSLRKLSKVKKTYLVAGLFSNHYKQSLMPPPAKVNKKPGL 1267
            .|...:.|..||.|..:..|:.|...:                                      
  Fly  3500 VSGGDSHGLLDYGSDQDELEENAYDCA-------------------------------------- 3526

  Fly  1268 EEQVGPASLLPPPPYCEKYLRRTEMDFELPYDIWWAYTNSKLPTRNVVPSW---NYRKIRTNVYA 1329
                          .||.|..|:|      ||::               ||   .:||....|: 
  Fly  3527 --------------RCEPYSNRSE------YDMF---------------SWLASRHRKQPIQVF- 3555

  Fly  1330 ESVRPNLAGFDHPTCNCKNQGEKSCLDNCLNRMVYTECSPSNCPAGEKCRNQKIQRHAVAPGVER 1394
              |:|:                    |   |.:|....:.||.|...|.|..| :.:....||  
  Fly  3556 --VQPS--------------------D---NELVPRRGTGSNLPMAMKYRTLK-ETYKDYVGV-- 3592

  Fly  1395 FMTADKGWGVRTKLPIAKGTYILEYVGEVV-------TEKEFKQRMASIYLNDTHHYCLHLDGGL 1452
            |.:...|.|:.....|..|..::||.||::       .|:.:..|....|:       ..:|..|
  Fly  3593 FRSHIHGRGLYCTKDIEAGEMVIEYAGELIRSTLTDKRERYYDSRGIGCYM-------FKIDDNL 3650

  Fly  1453 VIDGQRMGSDCRFVNHSCEPNCEMQKWSVNGLSRMVLFAKRAIEEGEELTYDYNFSLFNPSEGQ- 1516
            |:|....|:..||:||.|||||..:...:.|...:::||.|.|.:||||||||.|    |.|.: 
  Fly  3651 VVDATMRGNAARFINHCCEPNCYSKVVDILGHKHIIIFALRRIVQGEELTYDYKF----PFEDEK 3711

  Fly  1517 -PCRCNTPQCR 1526
             ||.|.:.:||
  Fly  3712 IPCSCGSKRCR 3722

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ash1NP_001246834.1 AWS 1340..1388 CDD:197795 9/47 (19%)
SET 1392..1512 CDD:214614 41/126 (33%)
Bromo_ASH1 1680..1787 CDD:99955
PHD_ASH1L 1858..1900 CDD:277023
BAH_polybromo 1929..2073 CDD:240068
trxNP_476769.1 NR_DBD_like 762..>856 CDD:295381
PHD1_KMT2A_like 1268..1344 CDD:276981
PHD 1346..1390 CDD:214584
PHD3_KMT2A_like 1423..1479 CDD:276983
ePHD_KMT2A_like 1737..1841 CDD:277134
FYRN 1891..1935 CDD:283589
FYRC 3388..3476 CDD:197781 13/90 (14%)
SET 3590..3710 CDD:214614 44/132 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467644
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.