DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ash1 and trr

DIOPT Version :10

Sequence 1:NP_524160.2 Gene:ash1 / 40133 FlyBaseID:FBgn0005386 Length:2226 Species:Drosophila melanogaster
Sequence 2:NP_726773.2 Gene:trr / 31149 FlyBaseID:FBgn0023518 Length:2431 Species:Drosophila melanogaster


Alignment Length:2119 Identity:379/2119 - (17%)
Similarity:627/2119 - (29%) Gaps:803/2119 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KVLETQRAQESGSENEETDSIT--------------------------DQSSQSKSIKSA----- 45
            |:|...::|||....||..:|.                          .|::||:||.:.     
  Fly   508 KILNKSKSQESTGGPEEFTNINSVVIKPLDKNTLNCPPSFNIFKQQQHSQAAQSQSISAVGSGAG 572

  Fly    46 --TQFSVQRSDTDGLRMRISAIRPTLGVVATKKPPKSRK--MSTQDTESGCSEAKNRAVSKKVK- 105
              ..|::...:...| ...|.:..:.|.:....|....:  :|.|:.......:|.....:|.| 
  Fly   573 TPVTFTMASGNASDL-ATTSTVSVSAGTICINSPMMGTRPIISIQNKNISLVLSKTTMAQQKPKM 636

  Fly   106 VKRKKLASSSGI---------SKSDKVSKSKKSQISAFSSDSED------DLPLKVHQQRAPRVL 155
            :....|:|.:.:         |.:||...|..|. ||.|..|..      :.|.|:....||.|:
  Fly   637 ITTTTLSSQAALQMHHALIQDSSADKAGSSANSG-SATSGASMQLKLTTANTPTKLSVSLAPDVV 700

  Fly   156 ----------------LSAIIQAAQSASKPTL-----DIG--------------ISSSDNELPNL 185
                            ..|:::  .|...||.     :||              |:...|:..|.
  Fly   701 KLEEVGSESKAKLLVKQEAVVK--DSTGTPTSEERAEEIGTPEKRLNANATMTAINQVQNQSANQ 763

  Fly   186 VQAAIK-------RVESDTEDTTVEGSFRKAAKD----KNLPQYQS---TLLQDFMEKTQMLGQT 236
            :|.|..       ...:.|.:.|...:.|.||:|    |.|.|..|   :|.|..:....:...:
  Fly   764 IQMATSTSTASNPSTPNPTVNATPMNNQRSAAEDNALLKQLLQNNSSSHSLNQISITSAHVGSAS 828

  Fly   237 VNAKLAEEKVAKAKEETLVQTAVPRKRRGRPKKVVPTVPAPGNSGPAINESADSGVISTTSTTQS 301
            .:|.|:..||...:..::.:......:..||  |:|.||   .:..|...|:.||.::|::||.:
  Fly   829 ASAPLSARKVINVRAPSMGKVRSLEDQLARP--VIPPVP---TATQAAGSSSSSGSVATSTTTTT 888

  Fly   302 TTPSPKMQNENAVPTGSLPIASSS------------KPKIDMAYLDKRMYATERVLYPPPRSKRR 354
            .......|........:||:::.:            :.|.|......:..:..:...|||..:::
  Fly   889 VASGGSSQQVATASATALPVSAVAITTPGVGGEAKLEQKSDQPAAIMQNQSQNQAPPPPPPPQQQ 953

  Fly   355 QNNKKTACSSSNKEELQLDPLWREIDVNKKFRLRSMSVGAASGTGASTTICSKVLAAKSGYVSDY 419
            |..:     ....::||..|    ..|.:..::.|......||..|:.|:.::..:..:..:.. 
  Fly   954 QQQQ-----LHQPQQLQPSP----HQVKQTVQIVSKETSFISGPVAAKTLVTEATSKPAELLPP- 1008

  Fly   420 GSVRHQRSSHNHNSGYKSDASCKSRYSTKSCMSRRSRAKSCGYRSDCKESGKSGLRMRRKRRASM 484
                         ..|:. |:......|.|..::::..|.              |:|:.|..|..
  Fly  1009 -------------PPYEM-ATAPISNVTISISTKQAAPKE--------------LQMKPKAVAMS 1045

  Fly   485 LLKSSADDTVEDQDILQL--------AGLSLGQ-----SSEESNEYISK---------------- 520
            |.....|:::.:|....|        ||::...     |::.:|.::..                
  Fly  1046 LPMEQGDESLPEQAEPPLHSEQGATAAGVAPHSGGPLVSAQWTNNHLEGGVATTKIPFKPGEPQK 1110

  Fly   521 --------------------PSLKSLPTTSASKKYGEINRYVTTGQYFGRGGSLSATNPD----- 560
                                |...|||||             .|||          ..||     
  Fly  1111 RKLPMHPQLDEKQIQQQAEIPISTSLPTT-------------PTGQ----------GTPDKVQLI 1152

  Fly   561 ----NFISKMMNQRKETPAPSKSSCKIKSRRSSAASM-------CSSYVSGVS--------RMRR 606
                .::.|.....:..|..::|..:::.:....|:|       .|..:||.:        .::.
  Fly  1153 SAIATYVKKSGVPNEAQPIQNQSQGQVQMQAQMQATMQGHLSGQMSGQISGHAAGQIPAQMHLQV 1217

  Fly   607 RH----------RRKSFSHNKSLNIDSKLLT----EIEIITSTFNSRC---------RIQDDRLT 648
            :|          :::....|:..|....|..    .:.|...|..|:.         .:|..|.|
  Fly  1218 QHQLHMAVHPQQQQQQLHQNQPQNATIPLPVTGQGAVPIPVPTMESKAGDQRKRRKREVQKPRRT 1282

  Fly   649 GSSGKEKLLADANKLQATLAAPSPAQQLTLNGGGPASTLSKPLKRGLKKRKLSEPLVDFAMLSAS 713
            ..:.     ..|......|..|.||..:....|.|..|                     ..:..:
  Fly  1283 NLNA-----GQAGGALKDLTGPLPAGAMVQLAGMPPGT---------------------QYIQGA 1321

  Fly   714 ASGTPN------------GSGSSNGNT------KRRHKKSQSNDSSSPDDHKL--------PL-- 750
            ||||.:            |.|:|.|.:      ||..|.|:..:.......||        ||  
  Fly  1322 ASGTGHVITSTGQGVTLGGVGASTGASSSPMLKKRVRKFSKVEEDHDAFTEKLLTHIRQMQPLQV 1386

  Fly   751 ------KKRHYLL----TPGERPPAEVAFANGKLNAEAWAAAAAAAKSTASTKSQAQFNARSVKS 805
                  :..|:|:    |.|...||.::.|     |.|.:::|...|....::.           
  Fly  1387 LEPHLNRNFHFLIGSNETSGGGSPASMSSA-----ASAGSSSAGGGKLKGGSRG----------- 1435

  Fly   806 ALTPKKRHL--LEQ-----------------PT------------SVSGAGSSASNSPLRIVVDN 839
              .|..|||  ||.                 |:            .|.|:..:.|.||.      
  Fly  1436 --WPLSRHLEGLEDCDGTVLGRYGRVNLPGIPSLYDSERFGGSRGLVGGSARTRSPSPA------ 1492

  Fly   840 NSISGGKLLDISPSSLCSLKQQ--------------RRGGAAKQKVSAAKDLVQLQSPAG----- 885
            .|....|:|.:|........|:              |..||.|.......|||:.:..|.     
  Fly  1493 ESPGAEKMLPMSSIQNDFYDQEFSTHMERNPRERLVRHIGAVKDCNLETVDLVESEGVAAWATLP 1557

  Fly   886 ---SYPPPGVFEPSVELEIQIPLSKLNESVITKAEVESPLLSAL--DIKEDTKKEVG-------- 937
               .||...:...:.....::....|.|..:|.....||||.:.  ::::..:.|:|        
  Fly  1558 RLTRYPGLILLNGNSRCHGRMSPVALPEDPLTMRFPVSPLLRSCGEELRKTQQMELGMGPLGNNN 1622

  Fly   938 --------QRVVETLLHKTGGNL--LLKRKRKKINRTGFPTVRRKKRKV--SVEQQTTAVIDEHE 990
                    |.|:..|......|:  :|:.....::.....|.:..:.|:  .:|.|.....||..
  Fly  1623 NNNYQQKNQNVILALPASASENIAGVLRDLANLLHLAPALTCKIIEDKIGNKLEDQFMNQDDEKH 1687

  Fly   991 PEFDPDDEPLQS-----LRE--------TRSSNNVNVQAAPNPPLDCERVPQAGEARETFVARTN 1042
            .:|   ..||..     ||:        .||..||                         |..|.
  Fly  1688 VDF---KRPLSQVSHGHLRKILNGRRKLCRSCGNV-------------------------VHATG 1724

  Fly  1043 QKAPRLSVVALER-----------LQRPQTP------------ARGRPRGRKPKNREQAEAAP-- 1082
            .:.||.||.|||.           |.|...|            ||.:..|:.    .|||||.  
  Fly  1725 LRVPRHSVPALEEQLPRLAQLMDMLPRKSVPPPFVYFCDRACFARFKWNGKD----GQAEAASLL 1785

  Fly  1083 -QPPPKSEPEIRPAKKRG------RQPKQPVLEEPP-------------PTPPPQQKK------- 1120
             ||...|..:.......|      ..|.:.|:::.|             ||..|.|:|       
  Fly  1786 LQPAGGSAVKSSNGDSPGSFCASSTAPAEMVVKQEPEDEDEKTPSVPGNPTNIPAQRKCIVKCFS 1850

  Fly  1121 ----------NKME-----------------------------------------------PNIR 1128
                      :.:|                                               |:..
  Fly  1851 ADCFTTDSAPSGLELDGTAGAGTGAGPVNNTVWETETSGLQLEDTRQCVFCNQRGDGQADGPSRL 1915

  Fly  1129 LPDGIDPNTNFSCKI------------RLKRRKNLEAGTQPKKEKPVQP-VTVE----------E 1170
            |...:|...:.:|.:            .:..:..|:||.........|| .|::          .
  Fly  1916 LNFDVDKWVHLNCALWSNGVYETVSGALMNFQTALQAGLSQACSACHQPGATIKCFKSRCNSLYH 1980

  Fly  1171 IPPEI----------------------------------------PVSQEEIDAEAEAKR----- 1190
            :|..|                                        .|:..|:.:....:|     
  Fly  1981 LPCAIREECVFYKNKSVHCSVHGHAHAGITMGAGAGATTGAGLGGSVADNELSSLVVHRRVFVDR 2045

  Fly  1191 ------------------------------------LDSIPTEHDPLP----------------- 1202
                                                |::..|.|...|                 
  Fly  2046 DENRQVATVMHYSELSNLLRVGNMTFLNVGQLLPHQLEAFHTPHYIYPIGYKVSRYYWCVRRPNR 2110

  Fly  1203 --------ASESHNP----GPQDYASCSESSEDKASTTS------LRKLSKVKKTYLVAGLFSNH 1249
                    |.....|    ..||........|.:.|:.|      |:.:::::|.:....||..|
  Fly  2111 RCRYICSIAEAGCKPEFRIQVQDAGDKEPEREFRGSSPSAVWQQILQPITRLRKVHKWLQLFPQH 2175

  Fly  1250 YK-QSL--MPPPAKV---NKKPGLEEQVGPASLLPPPPYCEKYLRRTEMDFELPYDIWWAYTNSK 1308
            .. :.|  :..||.|   ...||:|...         .|..||.|...::|.|..:...|.... 
  Fly  2176 ISGEDLFGLTEPAIVRILESLPGIETLT---------DYRFKYGRNPLLEFPLAINPSGAARTE- 2230

  Fly  1309 LPTRNVVPSWNYRKIRTNVYAESVRPNLAGFDHPTCNCKNQ---------GEKSCLDNCLNRMVY 1364
             |.:..:..|  ||..|...|.|              |..|         ||.:|..:  .:.|:
  Fly  2231 -PKQRQLLVW--RKPHTQRTAGS--------------CSTQRMANSAAIAGEVACPYS--KQFVH 2276

  Fly  1365 TECSPSNCPAGEKCRNQKIQRHAVAPGVERFMTADKGWGVRTKLPIAKGTYILEYVGEV------ 1423
            ::.|.......|...|..:.|..:           :|.|:.....|.|.|.|:||:|||      
  Fly  2277 SKSSQYKKMKQEWRNNVYLARSKI-----------QGLGLYAARDIEKHTMIIEYIGEVIRTEVS 2330

  Fly  1424 -VTEKEFKQRMASIYLNDTHHYCLHLDGGLVIDGQRMGSDCRFVNHSCEPNCEMQKWSVNGLSRM 1487
             :.||:::.:...||:       ..||...|:|....|...|::||||.|||..:...|:...|:
  Fly  2331 EIREKQYESKNRGIYM-------FRLDEDRVVDATLSGGLARYINHSCNPNCVTEIVEVDRDVRI 2388

  Fly  1488 VLFAKRAIEEGEELTYDYNFSLFNPSEGQPCRCNTPQCR 1526
            ::||||.|..||||:|||.|.:.:.|...||.|..|.||
  Fly  2389 IIFAKRKIYRGEELSYDYKFDIEDESHKIPCACGAPNCR 2427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ash1NP_524160.2 PHA03247 <1018..1281 CDD:223021 71/516 (14%)
AWS 1340..1388 CDD:197795 10/56 (18%)
SET_ASH1L 1391..1531 CDD:380951 50/143 (35%)
Bromo_ASH1 1680..1787 CDD:99955
PHD_ASH1L 1858..1900 CDD:277023
BAH_polybromo 1929..2073 CDD:240068
trrNP_726773.2 PHA03255 184..>320 CDD:165513
PRK13914 <623..>851 CDD:237555 46/230 (20%)
ePHD2_KMT2C_like 1898..2002 CDD:277136 12/103 (12%)
FYRN 2067..2118 CDD:461787 4/50 (8%)
FYRC 2126..2215 CDD:197781 21/97 (22%)
SET_KMT2C_2D 2278..2430 CDD:380948 54/168 (32%)
Blue background indicates that the domain is not in the aligned region.

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