DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ash1 and set3

DIOPT Version :9

Sequence 1:NP_001246834.1 Gene:ash1 / 40133 FlyBaseID:FBgn0005386 Length:2226 Species:Drosophila melanogaster
Sequence 2:NP_594837.1 Gene:set3 / 2541899 PomBaseID:SPAC22E12.11c Length:859 Species:Schizosaccharomyces pombe


Alignment Length:528 Identity:99/528 - (18%)
Similarity:162/528 - (30%) Gaps:236/528 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly  1858 IRCICGLYKDEGLMIQCSKCMVWQHTECTKADIDADN----YQCERCEPREVD----REIPLEEF 1914
            |||:|....|:|..|||..|.||||..|  .:|||:|    |.||:|:||.:|    .:|.|...
pombe     4 IRCVCPFEDDDGFTIQCESCEVWQHAVC--VNIDANNVPEKYFCEQCQPRPIDADKAHKIQLARL 66

  Fly  1915 -TEEGHRYYLSLMRG------------------DLQVRQGD------AVYVLR------------ 1942
             .||.....||..|.                  ....|||:      |::...            
pombe    67 QREEEQSRILSRSRSSNNKRRTSFGKNGASPTHSASPRQGNNTGANGALFSQSTNSSNSGSYRNS 131

  Fly  1943 ----------------------------DIPIKDESG--------KVLPTKKHTYETIGAIDYQE 1971
                                        :.||.:.|.        :.:|.:.:|: :..|::|.:
pombe   132 VTGATLPNAHAPHSQNRRRRSNHLNNPPEAPITEASNEYVYSFHLEYVPLESNTF-SASALEYSK 195

  Fly  1972 ----------------CDIFRV---------------------------------EHLWKNELGK 1987
                            |.:..:                                 ::.:|::...
pombe   196 NLDLKNLDESEVLMDGCQVVPISSSKFCCSRFGLVSTCEIPPNTPIMEVKGRVCTQNEYKSDPKN 260

  Fly  1988 RF-IFGHHFLRPHETFHEPSR------------RFY-----------------PNEVVRVSLY-- 2020
            :: |.|..  :||..|...|:            ||.                 .|.|.|..||  
pombe   261 QYNILGAP--KPHVFFDSNSQLVVDSRVAGSKARFARKGCQSNSVVSSVYMNGSNSVPRFILYST 323

  Fly  2021 -EVVPIELVIGRCWVLDRT----TFCKG--RPM--------------------EC--NDEDHC-- 2054
             .:.|...:||. |.||.:    .|..|  ||.                    ||  .|:.:|  
pombe   324 THIAPETEIIGD-WTLDISHPFRQFAPGMSRPSFNMEELELLSEVLSTFLSFNECASQDKKNCVF 387

  Fly  2055 -----YICELRVDKTARFFSKAKANHPACTKSYAFRKFPEKIKISKSYAPHDVDPSLLKTRKQKT 2114
                 ||...|...||...|.||                :::.::.|..|....|:        .
pombe   388 SRVTKYIKAARRASTANRVSVAK----------------DRLSLTPSSTPSTPSPA--------E 428

  Fly  2115 ELDVGAGPTTMHKVSGRQ---EQHQAKMVGRKPRGISAPADATAVHVV-----TPVAPNKQMLKK 2171
            .|...:.||:::..|.::   ::::..::.:.|...|.|.::..:.||     .|....|:..|.
pombe   429 SLPQPSNPTSVYAKSLKEFWLDKYRLSILQKWPAVKSLPTESVGIDVVMEPKLQPSVKEKKPTKD 493

  Fly  2172 RKSRLENV 2179
            .:|.|.:|
pombe   494 LQSPLPSV 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ash1NP_001246834.1 AWS 1340..1388 CDD:197795
SET 1392..1512 CDD:214614
Bromo_ASH1 1680..1787 CDD:99955
PHD_ASH1L 1858..1900 CDD:277023 22/45 (49%)
BAH_polybromo 1929..2073 CDD:240068 47/314 (15%)
set3NP_594837.1 PHD_MLL5 5..48 CDD:277025 21/44 (48%)
SET 215..343 CDD:214614 20/130 (15%)
SET 284..826 CDD:225491 47/243 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

Return to query results.
Submit another query.