DRSC/TRiP Functional Genomics Resources

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Protein Alignment ash1 and cti6

DIOPT Version :9

Sequence 1:NP_001246834.1 Gene:ash1 / 40133 FlyBaseID:FBgn0005386 Length:2226 Species:Drosophila melanogaster
Sequence 2:NP_595212.1 Gene:cti6 / 2539769 PomBaseID:SPBC1685.08 Length:424 Species:Schizosaccharomyces pombe


Alignment Length:180 Identity:54/180 - (30%)
Similarity:77/180 - (42%) Gaps:51/180 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1815 EEEPGKIAVKKSPGAKERDSPIVPLKVTPPPLLPIEASPDEDVIRCICGLYK------DEGLMIQ 1873
            |||..||  :|||    .|:|..| ..:.......|.|...:|.||:||:.:      |.||.||
pombe    13 EEESEKI--QKSP----VDTPHTP-NGSVSDNEENETSSTGEVTRCVCGIVESDDEASDGGLYIQ 70

  Fly  1874 CSKCMVWQHTECT----KADIDADNYQCERCEPREVDREIPLEEFTEEGHRYYLSLMRGDLQVRQ 1934
            |.:|.||||..|.    :::: .:.|.||.|.|              |.|:.| ...||..|.: 
pombe    71 CDQCSVWQHGNCVGFADESEV-PEVYYCEICHP--------------EFHKVY-QRGRGAKQSK- 118

  Fly  1935 GDAVYVLRDIPIK----DESGKVLP---TKKHTYETI------GAIDYQE 1971
                |:....||:    :||....|   |||.:.:.:      .|:||:|
pombe   119 ----YLGNGKPIEASQTEESSSTPPSPATKKSSKQRLTMNSRDAALDYEE 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ash1NP_001246834.1 AWS 1340..1388 CDD:197795
SET 1392..1512 CDD:214614
Bromo_ASH1 1680..1787 CDD:99955
PHD_ASH1L 1858..1900 CDD:277023 19/51 (37%)
BAH_polybromo 1929..2073 CDD:240068 14/56 (25%)
cti6NP_595212.1 PHD_SF 50..100 CDD:304600 19/50 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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