DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ash1 and set1

DIOPT Version :9

Sequence 1:NP_001246834.1 Gene:ash1 / 40133 FlyBaseID:FBgn0005386 Length:2226 Species:Drosophila melanogaster
Sequence 2:NP_587812.1 Gene:set1 / 2538762 PomBaseID:SPCC306.04c Length:920 Species:Schizosaccharomyces pombe


Alignment Length:950 Identity:189/950 - (19%)
Similarity:316/950 - (33%) Gaps:299/950 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   760 GERPPAEVAFANGKLNAEAWAAAAAAAKSTASTKSQAQFNARS------VKSALTPKKRHLL--- 815
            |..||.:|..:|               .|...|..|.:::.:|      :...|.|.....|   
pombe    89 GPEPPTQVFVSN---------------ISPLVTSEQLRYHFKSFGEVFDLDLKLNPYTGTSLGLC 138

  Fly   816 ----EQPTSVSGAGSSA------------SNSPLRIVVDNNSISGGKLLDISPSSLC-------- 856
                ::.:|:|.|..||            |..||.:|:|.:            .|||        
pombe   139 CISFDKRSSISVAAHSAKIAVQQANGLRFSGKPLSVVLDRD------------GSLCEEAFKKAL 191

  Fly   857 ----------SLKQQ---RRGGAAKQKVSAA--KDLVQLQSPA--------GSYPPPGV------ 892
                      :|::|   |...:::||:|||  :|:...:.|:        |......|      
pombe   192 NAVEKQFQEETLQKQRFEREDESSRQKLSAAMNEDIPPWRQPSKNSQTLSNGDLQHSKVQNVDQK 256

  Fly   893 --FEPSVELEIQIPLSKLNESVITKAEVESPLLSALDIKEDTKKEVGQRVVETLLHKTGGNLLLK 955
              |..|.|.::...::.....:|....|....:...|||...:|.:.:::   .::|.|..:...
pombe   257 SGFLTSSETDVPKNINDYIYLLIDDRFVPPDRVYYTDIKHHFRKFLYEKI---YMNKDGFYITFN 318

  Fly   956 RKR------KKINRTGFPTVRRKKRKVSVEQQTTAVIDEHEPEFDPDDEPLQSLRETRSSNNVNV 1014
            ..|      :.::||.....|.|.:...:..:|                     :|....:.|..
pombe   319 NYREASNCYRALDRTYVQNCRIKLKFHDIPSRT---------------------KEDGKKSAVRR 362

  Fly  1015 QAAPNPPLDCERVPQAGEARETFVARTNQKAPRLSVVALERLQRPQTPA-----RGRPRGRKPKN 1074
            ...|         |:...|..|.|...:.:|..|..|..:.:    .||     ...|   ||..
pombe   363 VVLP---------PEEAYAEATSVVLRDLEAALLRDVKSKII----GPAIFKYLHSMP---KPSV 411

  Fly  1075 REQAEAAPQPPPKSEPEIRPAKKRGRQPKQPVLEEPPPTPPPQQKKNKMEPNIRLPDGIDPNTNF 1139
            :|:.:........|.|:: |.|......|.|.|        |:.||......:.|..|    :..
pombe   412 KEELQENLLVSSTSVPDV-PLKIESTVGKLPSL--------PKFKKRVDSSKMNLSAG----SKT 463

  Fly  1140 SCKIRLKRRKNLEAGTQPKKEKPVQPVTVEEIPPEIPVSQEEIDAEAEAKRLDSIPTEHDPLPAS 1204
            ..|::.:||:..||.....:...:...:..|...:..:.....|...|..::.||.:     ..|
pombe   464 KSKLQRRRRRRHEARPLHYQLNQMYNSSASEAESDQELLLSSGDERVERGKIGSIKS-----VKS 523

  Fly  1205 ESHNPGPQDYASCSESSEDK------ASTTSLRKLSKVKKTYLVAGLFSNHYKQSLMPPPAKVNK 1263
            :...|...|    :....||      .|..|.:|..|::..|..:.  ......|::.|.|.:.|
pombe   524 DEATPVFSD----TSDENDKFHRFRTKSKISKKKYEKMEVDYTSSS--ETESDASILSPSAAIPK 582

  Fly  1264 KPGL--EEQVGP-------ASLLP------------------PPPYCE----------KYLRRTE 1291
            ....  :|.:.|       .:|.|                  |..|.|          :||.:.:
pombe   583 SGSAIKDELISPKKEIDEVLALAPKWRINEFDETGSVYYGALPYNYPEDDVLLDLDGLQYLVKND 647

  Fly  1292 MDF---------ELPYDI----WWAYTNSKLPTRNVVPSWNYRKIRTNVYAES---VRPNLAGFD 1340
            .|:         |...||    :|||.......:|    .:.:...|.:..|.   .|.|.:|  
pombe   648 EDYSYLQEALKDEPLMDINDPNFWAYERKSCKFKN----GDVKYGDTAILPEPKGYFRSNTSG-- 706

  Fly  1341 HPTCNCKNQG-------EKSCLDNCLNRMVYTECSPSNCPAGEKCRNQKIQRHAVAPGVERFMTA 1398
                :.|::|       |||......||......|.|.  :....|..::....:|.|||     
pombe   707 ----SAKSEGYYIIPTTEKSLYLPLRNRSTIDTISHST--SRITSRMNRVNNRRLAAGVE----- 760

  Fly  1399 DKGWGVRTKLP-----------------------------------IAKGTYILEYVGEVVTEKE 1428
                  :::||                                   |.|...::||:||::.::.
pombe   761 ------KSQLPAEADLLRFNALKARKKQLHFGPSRIHTLGLFAMENIDKNDMVIEYIGEIIRQRV 819

  Fly  1429 FKQRMASIYLND--THHYCLHLDGGLVIDGQRMGSDCRFVNHSCEPNCEMQKWSVNGLSRMVLFA 1491
            ...|..: |:.:  ...|...:|..:::|..:.|:..||:||||.|||..:...|.|..::|::|
pombe   820 ADNREKN-YVREGIGDSYLFRIDEDVIVDATKKGNIARFINHSCAPNCIARIIRVEGKRKIVIYA 883

  Fly  1492 KRAIEEGEELTYDYNFSLFNPSEGQ--PCRCNTPQCRGVI 1529
            .|.|..||||||||.|    |.|..  ||.|..|.|||.:
pombe   884 DRDIMHGEELTYDYKF----PEEADKIPCLCGAPTCRGYL 919

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ash1NP_001246834.1 AWS 1340..1388 CDD:197795 10/54 (19%)
SET 1392..1512 CDD:214614 40/156 (26%)
Bromo_ASH1 1680..1787 CDD:99955
PHD_ASH1L 1858..1900 CDD:277023
BAH_polybromo 1929..2073 CDD:240068
set1NP_587812.1 RRM <90..>226 CDD:223796 32/162 (20%)
RRM_spSet1p_like 96..180 CDD:240749 19/110 (17%)
SET_assoc 279..342 CDD:288600 12/65 (18%)
SET 457..920 CDD:225491 109/505 (22%)
N-SET 641..771 CDD:288597 31/152 (20%)
SET 783..899 CDD:214614 35/116 (30%)
PostSET 904..920 CDD:214703 7/15 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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