DRSC/TRiP Functional Genomics Resources

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Protein Alignment ash1 and set-15

DIOPT Version :9

Sequence 1:NP_001246834.1 Gene:ash1 / 40133 FlyBaseID:FBgn0005386 Length:2226 Species:Drosophila melanogaster
Sequence 2:NP_001370771.1 Gene:set-15 / 187813 WormBaseID:WBGene00020006 Length:611 Species:Caenorhabditis elegans


Alignment Length:599 Identity:134/599 - (22%)
Similarity:200/599 - (33%) Gaps:192/599 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1069 GRKPKNREQAEAA-PQPPPKSEPEIRPAKKRGRQPKQPVLEEPPP-------------TPPPQQK 1119
            ||..:.|.....| .||..:|:.|...:||...|.|:.:.::|..             |.....:
 Worm    18 GRSFRKRSVTSLANEQPAKRSKTEGSDSKKLNNQMKRLMAKDPKKLSFNEATLLSELLTTCCTVE 82

  Fly  1120 KNKMEPNIRLPDGI----------DPNTNFS-CKIRLKRRKN-LEAGTQPKKEKPVQPVTVEEIP 1172
            :.|:.|. |...|.          |.|.|.. .|...|::.| ||..:  ||:|.......|   
 Worm    83 RKKVIPK-RKGGGALRKSPVDFQNDENRNTKPIKSGRKKKDNLLEQAS--KKDKIAAKYRNE--- 141

  Fly  1173 PEIPVSQEEIDAEAEAKRL---DSIPTEHDPLPASESHNPGPQDYASCSE----SSEDKASTTSL 1230
                :....|.|..|.|::   .|..||.|.....:         |.||.    .|:.:.....:
 Worm   142 ----IFAHSIIANLEIKKILTKTSKATEKDLKLFLK---------AECSVRNAIKSDPELDGFYV 193

  Fly  1231 RKLSK-VKKTYL--VAGLFSNHYKQSL----MP----------------------PPAK---VNK 1263
            |...| :.||.|  :|.:..||...:.    ||                      ||.|   |.|
 Worm   194 RTCGKLINKTVLNTMADMMDNHMATTRLLWNMPRHEFPVDFHEKFVDFALNVSYTPPKKRIFVEK 258

  Fly  1264 KPGLEEQVGPASLLPPPPYCEKYLRRTEMDFELPYDIWWAYTNSKLPTRNVVPSWNYRKIRTNVY 1328
            |. .|:.:...:.:|         ..|.....|.....:.||.     ||||....|.::.. :.
 Worm   259 KL-FEKSISTFTDIP---------GETHRTISLGNTFVYKYTE-----RNVVDVEKYPELHA-LT 307

  Fly  1329 AESVRPNLAGFDHPTCNCKNQGE-KSCLDN----CL-------------NRMVYTE--------- 1366
            .|:.|||    :...|.|.:.|. |.|.:|    |.             |..:.|:         
 Worm   308 EEAERPN----NVIRCECCSSGSIKKCWNNPDCFCFQMNLKLRKEQDPKNNKLLTDFSTFDPVFI 368

  Fly  1367 -------------CSPSNCPAGEKCRNQKIQRHAVAP--GVERFMTADK----GWGVRTKLPIAK 1412
                         || .||..|.||.|    ...:.|  .:.:|....|    |:.:||...|..
 Worm   369 RERNHFFDTIGFACS-ENCACGGKCTN----NITLLPEKNINKFEIYRKNEIMGFAIRTLNSIPA 428

  Fly  1413 GTYILEYVGEVVTEKEF------KQRMASIYLNDTHHYCLH---------------------LDG 1450
            ||.::|:.||::   :|      .|..|...:|:.|:  ||                     |..
 Worm   429 GTPVMEFTGELM---DFDILDNIDQDYAFEIVNEAHN--LHETLPNFNKRWSENFKSSLKKQLAR 488

  Fly  1451 GLVIDGQRMGSDCRFVNHSCEPNCEMQKWSVNGLS----RMVLFAKRAIEEGEELTYDYNFSLFN 1511
            ...::.:|:|:..|...|||:||..|.:....|.|    :::|.....|..|.|||:||.....|
 Worm   489 PWFVNPKRIGNVARICCHSCQPNMAMVRVFQKGFSPAHCKLLLVTLEDIFPGVELTFDYGPGYLN 553

  Fly  1512 PSEGQPCRCNTPQC 1525
            ..:| .|.|....|
 Worm   554 ELKG-GCLCERIGC 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ash1NP_001246834.1 AWS 1340..1388 CDD:197795 17/87 (20%)
SET 1392..1512 CDD:214614 38/154 (25%)
Bromo_ASH1 1680..1787 CDD:99955
PHD_ASH1L 1858..1900 CDD:277023
BAH_polybromo 1929..2073 CDD:240068
set-15NP_001370771.1 SET 405..554 CDD:214614 38/153 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165851
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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