DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ash1 and set-9

DIOPT Version :9

Sequence 1:NP_001246834.1 Gene:ash1 / 40133 FlyBaseID:FBgn0005386 Length:2226 Species:Drosophila melanogaster
Sequence 2:NP_001379880.1 Gene:set-9 / 177196 WormBaseID:WBGene00017482 Length:1623 Species:Caenorhabditis elegans


Alignment Length:1582 Identity:292/1582 - (18%)
Similarity:488/1582 - (30%) Gaps:542/1582 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   671 SPAQQLTLN---GGG-PASTLSK-----PLKRGLKKRKLSEPLVDFAMLSASASGTPNGSGSSNG 726
            ||..|...|   ||| |:::::.     |::..::.|    |:|.....|...:....|     |
 Worm   205 SPGTQYRRNQQAGGGLPSTSVASQQQQLPVRHNIQNR----PMVAAQPFSIGGNQVEYG-----G 260

  Fly   727 NTKRRHKKSQSNDS-----SSPDDHKLPLKKRHYLLTPGERPPAEV--------------AFANG 772
            ...|..::....|.     .:...:.||::.   ||.|...|.|..              |.|.|
 Worm   261 MDSRMQQRGVVRDGPQYRVMNDFGNGLPMRG---LLPPRNSPAANAINRAREQQQQMYHQAGARG 322

  Fly   773 KLNAEAWAAAAAAAKSTASTKSQAQFNARSVKSALTPKKRHLLEQ--PTSVSGAGSSASNSPLRI 835
            .|...|..|.|      ..|....|....:|........|.:..|  |..:.||.::....|..:
 Worm   323 SLQQRAAPAPA------DPTPGSYQHIVNAVPGGGANPMRRVPPQARPGMIGGAANNNRARPTHV 381

  Fly   836 V--VDNNSIS---------GGKLLDISPSSLC-----SLKQQRRGGAAKQKVSAAKD-----LVQ 879
            .  :|.....         ..:::|::|..:.     .|:|..|..||.|..:||..     :|.
 Worm   382 TRPMDTQEFEHPVAPAAAPPHRVVDVAPHRMTPEQRQELQQMNRQRAAPQFPAAAAQRSAEVIVI 446

  Fly   880 LQSPAGSYPPPGVFEPSVELE--IQIPLSKLNESVITKAEVESPLLSALDIKEDTKKEVGQRVVE 942
            .|.|..|...|   .||:..|  ::.|..:|:|.|  ..|.::|:|..                 
 Worm   447 QQRPGASSRAP---RPSMAQEDLLRSPTRRLSERV--PQEHQTPVLEP----------------- 489

  Fly   943 TLLHKTGGNLLLKRKRKKINRTGFPTVRRKKRKVSV--------EQQTTAVIDEHEPEFDPDDEP 999
                        :|.:.|:..|....:.:...::..        |:...|...|..|:..|:|.|
 Worm   490 ------------RRFQVKVTDTYSTPIPKASDQLPAQLTEEDPPEESAAAAAPEDVPDAAPEDPP 542

  Fly  1000 LQSLRETRSSNNVNVQAAPNPPLDCERVPQAGEARETFVAR--TNQKAPRLSVVAL-ERLQRPQT 1061
            ...|:             |.||   .|:.|  |.:....||  |:::.|..|...| :....|..
 Worm   543 KVILK-------------PTPP---HRMTQ--EEKNAHFARLTTDKEKPTSSTSILPQDAAPPHV 589

  Fly  1062 PARGRPRGRKPKNREQA--------EAAPQPP--PKSEPEI------------------------ 1092
            |....|...:|.::::.        |:.|:.|  ||.:..|                        
 Worm   590 PPPPPPLVLRPHHQDETLAMVQSVFESKPRQPDTPKDKETISKIADLLRFSADEFTGQSGSSAAA 654

  Fly  1093 ----------------------------------RPAKKR-----GRQPKQPVLEEPPPTPPPQQ 1118
                                              ||:..|     |..|.|   ::|||.|...|
 Worm   655 RQRTVSGSAARAQTYQMHHQQQQHHHQMPMDQRKRPSSGRYDALMGAMPLQ---QQPPPPPSQFQ 716

  Fly  1119 KKNKMEPNIRLPDGIDPNTNFSCKIRLKRRKNLEAGTQPKKEKPVQPVTVEEIPPEIPVSQEEID 1183
            ..:.:   ...|.|           |.|..::.....||::....:     .:||..........
 Worm   717 HTDSI---AHRPRG-----------RPKGTRHPSVAVQPQRSGGAR-----TLPPRAQTVAMSAR 762

  Fly  1184 AEAEAKRLDSIPTEHDPLPASES----------HNPGPQDYASC-----------------SESS 1221
            ..|.||..|| .:|.....|.||          |..|  |...|                 |.:|
 Worm   763 NGANAKNSDS-ESEGIDEAAEESWTMRCHCGMDHGDG--DTIECEGCKTWQHMACMGLTLKSNTS 824

  Fly  1222 EDKASTTSLRKL--SKV----KKTYLVAGLFSNHYKQSLMPPPAKVNKK---PGLEEQVGPASLL 1277
            :.|......|:|  ||.    ::..::..|.:...||.....|.:..:|   |....:..|.:|.
 Worm   825 KYKCEMCLPRRLPVSKAEAAREQERILNRLRAAARKQKRKSEPVEQKQKSSQPSTSRKSAPMALQ 889

  Fly  1278 PPPPYCEKYLRRTEMDFELPYDIWWAYTNSKLPTRNVVPSWNYRKIRTNVYAESVRPNLAGFDHP 1342
            .|.                                      ..|..:.|.|::.....|.|.:  
 Worm   890 QPA--------------------------------------EPRVAQLNDYSKQASALLFGME-- 914

  Fly  1343 TCNCKNQGEKSCLDNCLNRMVYTECSPSNCPAGEKCRNQKIQRHAVAPGVERFMTADKGWGVRTK 1407
                :..|..:.|                   .|...::|.:|..|...||..:|.|.       
 Worm   915 ----QTAGADTLL-------------------AESRLHKKARRMFVEEAVEALVTTDL------- 949

  Fly  1408 LPIAKGTYILEYVGEVVTEKEFKQRMASIYLNDTHHYCLHLDGGLV----------------IDG 1456
              :.....|||..|.|....|.|::...       ..|:.:..||:                ||.
 Worm   950 --VQIRQVILEVNGHVSMSSEVKRQPGG-------GNCIFMYDGLMKGTAGEDMGDGQELVCIDT 1005

  Fly  1457 QRMGSDCRFVNHSCEPNCEMQK-WSVNGLSRMVLFAKRAIEEGEELTYDYNFSLFN--------- 1511
            :|.|:|.:|...||.|||.::. ...|....:::.|.:.|....|:|..::.....         
 Worm  1006 KRKGNDTKFTRRSCVPNCVLKHVLGSNATLGIMIVATKDITRNTEVTLPFDADWRESEVELECAE 1070

  Fly  1512 --------PSEGQPCRCNTPQCRGVIGGK----------------SQRVKPLPAVEAKPSGEGLS 1552
                    |.|.:..|....:.|.:...|                .:.|:...|.:.|...|...
 Worm  1071 HMKELQACPFESERRRFAAERHRAMDHKKQEAEEARRADEERRRLEEEVRRERAAKTKQMDEAEK 1135

  Fly  1553 GRNGRQRKQKAKKHAQRQAGKDISSAVAVAKLQPLSEKEKKLVRQFNTFLVRNFEKIRRCKAKRA 1617
            .|...::..:.:|.|:.:...:.|:|.|......::.:|::.::|......|..|:.:|.:|:|.
 Worm  1136 ARLEAEKAAEKEKKAKERKKMEASAAAAPESTNSITAREERRIQQAEEMFRRQEEEGKRKEARRR 1200

  Fly  1618 SDAAATASSPALGTT------NGDIPGRRPSTPSS---------PSLAAQISALCSP-----RNI 1662
            |.:.......|.||.      ...||...||.|:|         ||    .|:..:|     :|.
 Worm  1201 SKSVTPGVLEAAGTAAREDAPEASIPVPAPSPPASRRSVSRTTQPS----TSSFATPTEPPAKNK 1261

  Fly  1663 KTRGLTQAVHDP--ELEKMAKMAVVLRDICSAMETLKMSDLLT--TVSSKKKKPIKTT------L 1717
            :.|.:.....:|  ..:::....|......:|.::.|.:...|  |..:|:.|.:..|      :
 Worm  1262 RMRSVVPPKSEPASSAKRVRATTVATPKATTANDSRKRTASATGKTPVAKRSKNVAPTSFALALI 1326

  Fly  1718 SGKLGSTAATSKV-----------------------EFRSIQAQVEQGHYKTPQEFDDHMQQLFV 1759
            ..:|...|..|.|                       :|..::||:|:         ::.|     
 Worm  1327 EKELREQARNSTVLEMILPDYIMNEERSGLLAGQSPDFSEVRAQIEE---------ENRM----- 1377

  Fly  1760 EAKQQHGDDEGKEKALQSLKDSYEQQKIASYVQLVEILGDSESLQSFKPKEVLSSEEEPG----- 1819
              |::....|.|:||::  |:..|.:|                    :||:.    .|||     
 Worm  1378 --KERSRKREAKKKAVE--KEKKEHRK--------------------EPKKT----NEPGPAPKS 1414

  Fly  1820 KIAVKKSPGAKERDSPIVPLKVTPPPLLPIEASP----DEDVIRCICGLYKDEGLMIQCSKCMVW 1880
            :.||:|:....|: .|..|.|   ||..|...:|    .|:|          :|:..:.|:.   
 Worm  1415 EKAVEKAVEKVEK-KPKSPQK---PPAKPTAQNPPLKKTEEV----------DGIEREASES--- 1462

  Fly  1881 QHTECTKADIDADN--------YQCERCEPREVDREIPLEEFTEEGHRYYLSLMRGDLQVRQGDA 1937
            ...|.:.|..:..|        |...|.:.||..........|..|   ::....|:      |.
 Worm  1463 SSKESSVAPEEKKNPKKITFAEYNSRRSQKREAGECSTPPAVTRRG---FIPSTEGE------DL 1518

  Fly  1938 VYV-LRDIPIKD--ESGKVLPT 1956
            |.| |..||:.|  .|....||
 Worm  1519 VNVELSAIPLDDHPSSSNTAPT 1540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ash1NP_001246834.1 AWS 1340..1388 CDD:197795 5/47 (11%)
SET 1392..1512 CDD:214614 30/153 (20%)
Bromo_ASH1 1680..1787 CDD:99955 24/137 (18%)
PHD_ASH1L 1858..1900 CDD:277023 6/49 (12%)
BAH_polybromo 1929..2073 CDD:240068 10/31 (32%)
set-9NP_001379880.1 PRK03427 <9..>132 CDD:235124
Med15 196..>373 CDD:312941 39/185 (21%)
PHD_Bye1p_SIZ1_like 788..831 CDD:277045 7/44 (16%)
SET_SETD5-like 927..1059 CDD:380927 33/147 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

Return to query results.
Submit another query.