DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ash1 and mes-2

DIOPT Version :10

Sequence 1:NP_524160.2 Gene:ash1 / 40133 FlyBaseID:FBgn0005386 Length:2226 Species:Drosophila melanogaster
Sequence 2:NP_496992.3 Gene:mes-2 / 175096 WormBaseID:WBGene00003220 Length:773 Species:Caenorhabditis elegans


Alignment Length:230 Identity:66/230 - (28%)
Similarity:94/230 - (40%) Gaps:46/230 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1319 NYRKIRTNVYAESVRPNLAGFDHPT---CNCKNQGEKS----CLDNCLNR---------MVYT-- 1365
            |..|:|............||..:.|   |.|:..|..|    |..||..|         ..||  
 Worm   516 NSEKVRMTAVTPITACRHAGPCNATAENCACRENGVCSYMCKCDINCSQRFPGCNCAAGQCYTKA 580

  Fly  1366 --------ECSPSNCPAGE---------KCRN----QKIQRHAVAPGVERFMTADKGWGVRTKLP 1409
                    ||:|..|...:         ||||    :.||:.... |..:.    .|.|:....|
 Worm   581 CQCYRANWECNPMTCNMCKCDAIDSNIIKCRNFGMTRMIQKRTYC-GPSKI----AGNGLFLLEP 640

  Fly  1410 IAKGTYILEYVGEVVTEKEFKQRMASIYLNDTHHYCLHLDGGLVIDGQRMGSDCRFVNH-SCEPN 1473
            ..|..:|.||.||.:::.| .:|..:||......|..:::.|..||..::|:..||.|| |..|.
 Worm   641 AEKDEFITEYTGERISDDE-AERRGAIYDRYQCSYIFNIETGGAIDSYKIGNLARFANHDSKNPT 704

  Fly  1474 CEMQKWSVNGLSRMVLFAKRAIEEGEELTYDYNFS 1508
            |..:...|.|..|:..:|||.:|..||||:||::|
 Worm   705 CYARTMVVAGEHRIGFYAKRRLEISEELTFDYSYS 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ash1NP_524160.2 PHA03247 <1018..1281 CDD:223021
AWS 1340..1388 CDD:197795 21/86 (24%)
SET_ASH1L 1391..1531 CDD:380951 40/119 (34%)
Bromo_ASH1 1680..1787 CDD:99955
PHD_ASH1L 1858..1900 CDD:277023
BAH_polybromo 1929..2073 CDD:240068
mes-2NP_496992.3 Septum_form <210..266 CDD:433522
preSET_CXC 568..600 CDD:408079 6/31 (19%)
SET_EZH 621..738 CDD:380917 39/122 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.