DRSC/TRiP Functional Genomics Resources

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Protein Alignment ash1 and set-13

DIOPT Version :9

Sequence 1:NP_001246834.1 Gene:ash1 / 40133 FlyBaseID:FBgn0005386 Length:2226 Species:Drosophila melanogaster
Sequence 2:NP_494371.1 Gene:set-13 / 173626 WormBaseID:WBGene00019690 Length:402 Species:Caenorhabditis elegans


Alignment Length:496 Identity:104/496 - (20%)
Similarity:169/496 - (34%) Gaps:157/496 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  1128 RLPDGIDPNTN-----FSCKIRLKRRKN------LEAGTQPKKEKPVQPVTVEEIPPEIPVSQEE 1181
            ||....|.|.:     ||.|:..:..::      :...||||.|:          .|.|||::..
 Worm    12 RLTTFTDSNISPTSLIFSSKMSSRTLRSSSSSNAISTKTQPKTEE----------APLIPVTKGP 66

  Fly  1182 IDAEAEAKRLDSIPTEHDPLPASESHNPGPQDYASCSESSEDKASTTSLRKLSKVKKTYLVAGLF 1246
            : ....:...|....:|...|::....   ..:.:......:|::..::|:..|::         
 Worm    67 V-IRMTSNMADKAQNDHSMWPSTSKFE---SIWGNVLGERVNKSTIAAIREGMKIE--------- 118

  Fly  1247 SNHYKQSLMPPPAKVNK-----KPGLEEQVGPASLLPPPPYCEKYLRRTEMDFELPYDIWWAYTN 1306
                           ||     :||.:....||        |..:...:.:......||   .|.
 Worm   119 ---------------NKVTCGCRPGQDCSTNPA--------CRCFQTASRLREHFGSDI---LTR 157

  Fly  1307 SKLPTRNV-VPSWNYRKIRTNVYAESVRPNLA--GFDHPTCNCKNQGEKSCLDNCLNRMVYTECS 1368
            .| |.:.| ...|:             ||..|  |    :|.||.|    |..|.|..:    |.
 Worm   158 GK-PVKTVDTMYWD-------------RPMFACSG----SCGCKGQ----CNLNALQDI----CE 196

  Fly  1369 PSNCPAGEKCRNQKIQRHAVAPGVERFMTADKGWGVRTKLPIAKGTYILEYVGEVV------TEK 1427
                   :..:..||.|           |..||:.|.:...|.||:.:||:.||:.      :..
 Worm   197 -------DPAKKFKITR-----------TDGKGFCVYSARVIKKGSPVLEFSGEITDYLAIKSNA 243

  Fly  1428 EFKQRMASIYLNDTHHYC--LHLDGGLV----------------IDGQRMGSDCRFVNHSCEPNC 1474
            :.:|....:|.|:| ..|  ...:..|.                |:....|:..||.:|.|:.|.
 Worm   244 DIEQYSIMLYNNET-KLCDFFSKEENLSSKYKKILWSAYRSKAWINPLNRGNCARFFSHGCKANM 307

  Fly  1475 EMQKWSVNGLS----RMVLFAKRAIEEGEELTYDYNFSLFNPSEGQPCRCNTPQCRGVIGGKSQR 1535
            |:.:....|.|    ::|||||..|:.|.|||::|..|......|..|.|..  |      |.:.
 Worm   308 ELGRVFQGGFSPADMKIVLFAKEIIKPGTELTFNYGPSYKEIFLGNKCLCEA--C------KKEA 364

  Fly  1536 VKPLPAVEAKPSGEGLSGRNGRQRKQ--KAKKHAQRQAGKD 1574
            ||.|.....:..      :|.|...:  ..||..::..||:
 Worm   365 VKKLENAVKRIL------KNSRDPSEPPSKKKSVKKLDGKE 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ash1NP_001246834.1 AWS 1340..1388 CDD:197795 11/47 (23%)
SET 1392..1512 CDD:214614 39/147 (27%)
Bromo_ASH1 1680..1787 CDD:99955
PHD_ASH1L 1858..1900 CDD:277023
BAH_polybromo 1929..2073 CDD:240068
set-13NP_494371.1 SET 200..348 CDD:214614 42/159 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165874
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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